Cohnella candidum: EAV92_06420
Help
Entry
EAV92_06420 CDS
T05696
Name
(GenBank) PAS domain S-box protein
KO
K07680
two-component system, NarL family, sensor histidine kinase ComP [EC:
2.7.13.3
]
Organism
coh
Cohnella candidum
Pathway
coh02020
Two-component system
coh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
coh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EAV92_06420
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EAV92_06420
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
coh01001
]
EAV92_06420
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
coh02022
]
EAV92_06420
Enzymes [BR:
coh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
EAV92_06420
Protein kinases [BR:
coh01001
]
Histidine kinases
NarL family
EAV92_06420
Two-component system [BR:
coh02022
]
NarL family
ComP-ComA (competence)
EAV92_06420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_9
PAS_4
PAS
PAS_8
HATPase_c
Diguanyl_cycl_sensor
HisKA_3
HATPase_c_2
NQRA_SLBB
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AYQ72235
UniProt:
A0A3G3JVH3
LinkDB
All DBs
Position
1363148..1366924
Genome browser
AA seq
1258 aa
AA seq
DB search
MVREFLDSLEMAVWSYDVAQDRITVSPGLQALYGYEQEDFDADPFLWRKLTVSEDQHIVA
DHLRKIHSGIGGTFEHRIVRKSGEIRWLQCMATPVMDGEGCVRKVYGINHDITDKKSMQA
SLEREREQINELLDSTDVAVWSYNCARGEFDYITNAVQRITGYPLDRFQDLKSWHEIVYP
DDARHYGAEFEKLKKSKRGAIEYRIVRADGQLRWVHVKVVLIPGDTMDGGRYEGLMLDVT
DRKSMEDALKRSEQKYKSLFDHHPDSIVELDPSGNIRAMNRSALDTLGVSGMDEGIFRYP
EFMSEEGINKATAHYRSTLNGEAQRFELATLHSEGHFADWDVRMIPIIVNGEVDGIFMIG
NEITARVKAEKSLAASEAMHRVITDNMQDFISVIDLDGRFLYASPSYAKRLGRDPHSLIS
TSAFELIIPEDREFAACSISQILLYNGDLQARIRCIHANGSLLHLEWIGSPVRDDAGRIV
SIVVVGRDITEQVRVENKLIESEKRYRRLIELSPVPIVSHKDGIVTYINQAGLKLFGADG
TDGPGGMIGRPALDVVVPQQTGIAISRMEQSKSSKFVGPMEYRLIRLDGRTIDVELTSIY
DDETESNLVVVHDVTEPKKMQAALRESEERYRRMVELSPMAIVVYKGNRITYANPTSLRI
VGASNLEEILDLDPISFVHPRYRELVRGRMVQTLREGHSPPAEYELIGLDGRIVDASVTA
IYDAVSETVLLVFMDVTARKQAERALMESEETNSRLVQLFPEAIVLHSDYRFEYVNPAAC
QLFGIAEHEPPNLDVLVCIHPDDREKACIRLNKVYDEGYTSPLVEQRIVRLDGSHVPVEV
ISAPISYRGKKAAISVFRDITERTRAEELRGLAERRLIESRDRYFFLQASLDRFSNDLFG
HVDVTELERRLVQEVRTVLQADLVSLVETDENDGIRVINGSVLREEAQAVLRERSRASQS
ICEMMAYPGGYLLKIVEIRGHSYWLCIGEMPPSLSQMPTRIWLETICRYVSVLYDNFRVI
EDLTRELKESTKQEPAPSWLLRLLFKLNEHERKRLSQDLHDAALQEQIIWYRKLDQLMAN
PAVSDELRVDMERIAQGLLDVIYQIRITCIDLRPPMLKEEGLVASLESLFEFTQMRTDYA
IRFQTNEFRAELNEEQSIGLYRIVQELLANATKHSNAAKVSFSLSQPANWVQLVYEDDGI
GMDMKKVEDTFVSMGMYGMRERVHSLNGKIVFRSKPNEGLTIYIRIPMSKQKEADRRD
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
ttggttcgcgaatttttggacagtttggaaatggcggtatggtcctatgacgtggctcag
gatcgaatcaccgtctcgccgggattacaagcgttatacggctatgagcaagaggatttc
gacgccgacccgtttctctggagaaagctcaccgtttccgaggaccaacatatcgttgct
gatcatctccgcaagatacacagcggaatcgggggtactttcgagcatcggatcgtccgt
aagtcgggagagattcgatggctgcaatgcatggcgacgccggtcatggacggagaaggc
tgcgtcaggaaagtatacggcatcaaccatgacatcactgataagaaatcgatgcaagcc
tcgttggaacgggaacgcgagcaaatcaacgagctgctggattcgacggatgtcgcggtt
tggtcttacaactgcgccagaggcgagtttgattacataacaaatgcggttcagaggatc
acggggtatccgctggaccgattccaagatctgaagtcttggcatgagatcgtctaccct
gacgacgcacggcactatggggccgaatttgaaaaactgaagaaaagcaagcggggggcc
atcgagtaccgcatcgtccgggcagacggccaactccgctgggttcacgtaaaggtggtc
ctcatccctggagacacgatggacggaggccggtatgaaggactcatgcttgacgtcacg
gaccgcaaatcgatggaggacgcgctgaagcgaagcgagcaaaaatacaaatctctgttc
gatcaccatcctgattcgatcgtcgaactggacccgtcgggcaatatccgcgcgatgaat
cgttcagcattggacacattaggagtttccggtatggacgaagggatattccggtatccg
gagttcatgagcgaagagggaatcaataaagccacggcgcactataggtcaaccttgaac
ggagaagcccaaaggttcgaacttgccacgctgcattcggaaggccactttgccgactgg
gacgtgaggatgatccccattatcgtgaacggcgaagtggacggtattttcatgatcggc
aatgagataacagccagggtgaaggcggaaaagtcgctggccgccagcgaagccatgcat
agggtcatcacggacaatatgcaggatttcatatccgtgatcgatctcgacggccgtttc
ctgtatgcgtcgccctcttacgcaaagaggctcggtcgcgatccccattcgcttatttcc
acctcggctttcgagttgatcatcccggaagaccgcgaattcgcggcttgctcgatctct
caaatccttttgtacaacggagatttgcaggcccgcattcgttgtatccacgcgaacggt
tcactcctccatctggaatggatcggttcacccgtacgtgacgatgcgggccggatcgtc
agcatcgtggtcgtgggaagggatatcacagaacaagtccgcgtggaaaacaagctgatc
gaaagcgaaaaacgttaccggcggctgatcgaactgtctccggtgcctatcgtttctcat
aaagacggcatcgtcacctacataaaccaggccggtcttaagcttttcggagcagacggg
accgacggaccgggcgggatgatcggaagacccgctttggatgtcgtcgtcccgcagcag
accggcatcgccatctcccgcatggaacaatcgaaatcgtccaaattcgtcggtcccatg
gaataccggttaattcggctcgacggacggacgatcgacgtggaattgacttcgatttac
gatgacgaaacggaatcgaacctggtcgtcgtccatgacgtaacggagccgaaaaaaatg
caggcagccctccgggaaagcgaagaacggtaccgccgcatggtggagctgtcgccgatg
gcgatcgtcgtctacaaaggcaaccggattacctacgcgaacccgaccagccttcgcatc
gtaggcgcgtcgaatctggaggagatcctggatctcgacccgatcagtttcgttcatccc
cgttaccgggagttggtccgaggccggatggtccaaacgctgcgcgaagggcacagtccg
cctgcggagtacgaactgatcgggctggacggcaggatcgtggacgcttcggtcaccgcc
atttacgatgccgtttccgagaccgtattgctcgttttcatggacgtaacggcgcgcaag
caagcggagcgcgctttgatggaaagcgaagaaacgaacagccggctcgtccagctgttt
ccggaagcgatcgtcctgcacagcgattaccgtttcgaatatgtcaaccccgccgcgtgc
caactgtttgggatcgcagaacacgaacccccaaacctcgacgttcttgtatgtatccac
cccgatgatcgggagaaagcctgtatccgcctaaacaaggtttatgacgaaggctacacc
agtcctctggtcgaacagagaatcgttcggcttgacggatcgcacgtccccgtcgaggtc
atttccgccccgatatcgtatcgggggaaaaaagcggccatttcggtcttccgcgacatc
accgagcgaacgcgcgcggaggagctgcgcgggctggccgaacgacggctgatcgaaagc
cgggaccgttatttctttttgcaggccagcctggatcggttctcgaacgacctgttcggc
catgtcgacgtgacggaacttgaacgaaggctcgttcaggaagtgaggaccgttttgcag
gcggatctcgtcagtctcgtcgaaacggatgaaaacgacggaatccgggtgatcaacgga
agcgtcctccgagaggaagcacaggccgtcttgcgcgaaagaagccgagcctctcaatcg
atttgcgaaatgatggcttatccgggcggatatttgctcaagatcgttgaaatccgcggc
cattcctactggctttgcatcggggaaatgcctccgtccttaagccaaatgccgacgcgg
atctggctcgagacgatctgccgttacgtcagcgtgctgtacgacaatttccgcgtcatc
gaggatttgacccgcgaattgaaagaatcgacgaagcaggagcctgcgccgtcctggctt
ctccggcttttgttcaaactgaatgaacatgagcgcaagcgcctctcccaagacttgcac
gacgcagccctgcaggaacagatcatttggtaccggaaactcgaccaattgatggcgaat
cccgcggtttcggatgagcttcgcgtcgatatggagcgcatcgcccaaggcttgctggac
gttatctaccagatccggatcacttgcatcgatctgcggccccccatgctgaaggaagag
ggcttggtcgcttccctggagtcgttgttcgagtttacgcaaatgcgcacggattacgcg
atccgctttcaaacaaacgaattccgcgcggagctgaacgaggagcaatcgatcggtctg
tatcggatcgtccaagagctgctggcgaacgccaccaagcactcgaacgccgcgaaggtt
tctttttccctgtcccagcccgccaattgggtccagttggtttacgaagacgacggaatc
ggcatggacatgaagaaggtggaggacacctttgtcagcatgggcatgtatgggatgcgc
gaaagggtgcacagcctgaacggtaaaatcgtcttccgttccaaaccgaacgagggactc
acgatttacatccggattccgatgagcaaacaaaaggaggcagatcgccgtgattga
DBGET
integrated database retrieval system
