Cohnella candidum: EAV92_08435
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Entry
EAV92_08435 CDS
T05696
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
coh
Cohnella candidum
Pathway
coh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
coh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EAV92_08435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
coh03400
]
EAV92_08435
Enzymes [BR:
coh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
EAV92_08435
DNA repair and recombination proteins [BR:
coh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
EAV92_08435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AYQ72590
UniProt:
A0A3G3JWG2
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All DBs
Position
complement(1788533..1789372)
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AA seq
279 aa
AA seq
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MRIGSHVSTRDGYRGAAVQAAAIGGNAFQYFPKNPRSLHVKPFDRRDAAACAEWCRENAV
SSIAHGPYPVNPAAEGEAAETMALSTLNDLDIANTCGSIGVVVHFGVYKGTDPLQGYRNI
IQWLNAVTSAWTGDAKILLENQAGDHGIFGTTPEELVQIRSLCAEPGKIGFCLDTCHLFA
SGEWKPGKWEAFAERARSLGYWDALEAVHLNDSKYESGSRRDRHAVLGKGFIGEDGFREM
LSTPEIRRVPLLLETPEETGGTHREQLALAKRWNGEEPT
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcggttctcacgtcagcacgagggacggctaccgcggcgcggcggtacaggcg
gccgcgatcggcggaaacgcctttcagtattttccgaaaaacccgcgcagcctgcacgtc
aagccgtttgatcggcgcgacgccgccgcctgcgcggaatggtgcagggagaacgccgtt
tcctcgatcgcccacggcccatatccggtcaatccggcggccgaaggtgaagcggcggag
acgatggcgttgtccacgctgaatgatctggacatcgcgaatacgtgcggatcgatcggc
gttgtcgtgcactttggcgtttataaagggaccgacccgttgcaagggtatcggaatatc
atccagtggctgaacgccgtcacttccgcatggacgggcgacgccaaaatcctgctcgaa
aaccaggcaggcgaccacggcatattcggcacgacgccggaagagcttgtccaaatccga
agcctgtgcgcggagcccggaaagatcgggttctgcctggatacgtgccatcttttcgcc
agcggcgaatggaaaccgggcaaatgggaagctttcgcggaaagggcgaggtctctcggt
tattgggatgcgctcgaggcggttcatctgaacgactccaaatatgagtccggttcccgc
agggaccggcatgccgttctcggcaaaggctttatcggggaggatggcttccgcgaaatg
ctgtccacgccggaaatccgccgcgtccctcttctgttggagacgccggaggagacgggc
ggaacgcaccgcgaacaattggcgctcgcgaaaagatggaacggggaggaaccgacatga
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