Cohnella candidum: EAV92_11100
Help
Entry
EAV92_11100 CDS
T05696
Symbol
lsa
Name
(GenBank) Lsa family ABC-F type ribosomal protection protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
coh
Cohnella candidum
Pathway
coh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
coh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
EAV92_11100 (lsa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
coh02000
]
EAV92_11100 (lsa)
01504 Antimicrobial resistance genes [BR:
coh01504
]
EAV92_11100 (lsa)
Transporters [BR:
coh02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
EAV92_11100 (lsa)
Antimicrobial resistance genes [BR:
coh01504
]
Gene variants
Macrolide resistance genes
Transporters
EAV92_11100 (lsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_23
AAA_14
AAA
Dynamin_N
YobI-ATPase
RsgA_GTPase
DUF4024
ATP-synt_ab
ABC_tran_Xtn
Motif
Other DBs
NCBI-ProteinID:
AYQ73065
UniProt:
A0A3G3JXU4
LinkDB
All DBs
Position
complement(2333982..2335463)
Genome browser
AA seq
493 aa
AA seq
DB search
MSMIKVSNLSFAYDGSYDNIFENVSFQMDTNWKLGFTGRNGRGKTTFLHLLLGKYEYSGT
ISANVSFDYFPFHVEHKEYNTIDIVEEICPDYEQWQLLRELSLLKVSDDVLYRPFETLSN
GEQTKVLLAALFLKENSFLLIDEPTNHLDLHARKLVSDYLNGKSGFILVSHDRAFLDNCV
DHVLAINKTNIEVQKGNFSDWWENKQRQDHFELAENDKLKKDIKRLSEAANRTSNWSHEV
EKTKNGTRNSGSKVDKGYIGHKAAKMMKRSKSLEHRQQSAIEEKSQLLKNVESSESLKIS
QLAYHKHQLVELDRVSIHYGGKTACRDVSFTIEQGDRIALTGPNGSGKSSLLKLICGEDI
PYSGVLRIGSQLKISYVSQDTSHLQGDLSDFARMSGIDESLFKSILRKLDFSRLQFEKDI
ASFSGGQKKKVLIAKSLCERVHLHVWDEPLNFVDIISRMQIEELLLEHAPTILFVEHDSE
FCKHIATKTIGLR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgatcaaggtatcgaacctgtcgtttgcctatgacggcagctacgacaacatt
ttcgagaacgtcagttttcaaatggatacgaactggaaattaggctttacgggaagaaac
ggccgaggcaaaaccacgtttctccatctcttgctcggcaaatacgaatacagcggaacg
atatcggcaaacgtcagtttcgattatttccccttccacgttgaacacaaagagtacaat
acgattgatatcgtcgaggaaatttgtccggactatgagcaatggcagttattgcgtgag
ctttcgcttttgaaagtgtcggacgacgtgctgtaccggccgttcgaaaccctgtccaat
ggggaacaaacgaaggtactgctggccgccttgtttttgaaggaaaacagctttctgctc
atcgacgagccgactaatcatctggacctgcatgcgcgaaagctggtcagcgattatctg
aacgggaagagcgggtttattttggtgtcgcacgaccgggcgttcctcgacaactgcgtg
gaccacgttcttgcgatcaacaaaaccaatatcgaagtccaaaaggggaatttttccgat
tggtgggagaacaaacaacggcaggaccatttcgaactcgccgagaacgataagctgaag
aaggacatcaagcgtctctccgaagcggccaaccggacgagtaactggtcgcacgaagtg
gaaaaaaccaagaatggcacccgcaactccggctctaaggtggataaaggttacattggc
cacaaagccgccaagatgatgaagaggtccaagtcgcttgagcataggcagcaatccgcg
atcgaagaaaaatcccagcttcttaaaaacgtcgaaagctcggagagcctgaaaatttcg
caactggcgtatcacaagcaccaactcgtcgagcttgaccgcgtttcgattcattacggc
gggaagaccgcttgccgcgacgtcagctttacgatcgaacaaggggaccgcatagcgctg
accggcccgaacggttcgggaaaatccagcttgctcaaactgatttgcggggaggatatt
ccttactccggcgtgctacgaatcggtagccagctgaaaatttcgtacgtctcacaagac
acctcgcatttgcagggagatttgtccgatttcgcgagaatgagcgggattgatgagagc
ttgttcaaatcgattttacggaagctcgatttttcgcgattgcaattcgagaaggacatc
gcttctttcagcggcggccagaagaagaaagtgctcatcgcgaaaagcctctgcgagcgg
gttcatttgcacgtttgggacgaaccgcttaatttcgtcgacatcatttcccggatgcag
atcgaagaactgcttcttgagcacgctccgaccatccttttcgtggagcatgacagcgag
ttttgcaagcatatcgcgacaaagacaatagggctccgatga
DBGET
integrated database retrieval system
