Cohnella candidum: EAV92_11480
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Entry
EAV92_11480 CDS
T05696
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
coh
Cohnella candidum
Pathway
coh03030
DNA replication
coh03430
Mismatch repair
coh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
coh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EAV92_11480
03430 Mismatch repair
EAV92_11480
03440 Homologous recombination
EAV92_11480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
coh03032
]
EAV92_11480
03400 DNA repair and recombination proteins [BR:
coh03400
]
EAV92_11480
Enzymes [BR:
coh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EAV92_11480
DNA replication proteins [BR:
coh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EAV92_11480
DNA repair and recombination proteins [BR:
coh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EAV92_11480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AYQ75614
UniProt:
A0A3G3K581
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All DBs
Position
complement(2433726..2434433)
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AA seq
235 aa
AA seq
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MWHLYKMGGITPAIASMMGSSNAQQMAFIRSMSREQRKENTLDTPLADLEAVVFDLETTG
FHPYNGDEIISVGGVRIKGGEFEEAEPFYRLVNPKRKIPKHIVELTGITNEMAEKGEDLM
QVLHDFMDFTGKRVLIAHGSGHDKQFLNSALWRTTKIHLSHRVLDTMMIAKWLDPKRGEY
GLDGLLESGGIPITERHHALHDSVMTAKLYFSFLKMIRSRQLVTLGDLYAYLSRH
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgtggcatttgtacaaaatggggggcatcactccggccatcgcgtcgatgatgggttca
tccaacgcgcagcagatggcgttcatccgttcgatgtcgcgggagcagcgcaaggaaaat
acgctggacacgccgctcgcggatctcgaggccgtcgtgttcgatttggaaacgaccggt
tttcatccttataacggtgacgaaattatatccgtaggcggcgtgcgcattaaagggggg
gaatttgaagaagcggagcccttctaccggctcgtcaacccgaagcgcaaaatcccgaag
cacatcgtcgaactcaccggcatcacgaacgaaatggccgaaaagggcgaagacttgatg
caggtgcttcacgatttcatggattttacggggaaacgggtattgatcgcgcacgggagc
gggcacgacaagcagtttttgaattccgcgctgtggcggacgacgaaaatccatctttcg
caccgggtgctggatacgatgatgatcgccaaatggctggatcccaaacggggcgaatac
ggtctggacgggctgctggaaagcggcgggatcccaatcacggaacgccatcacgcgctt
cacgattcggtgatgaccgccaagctctatttctcgtttttgaaaatgatacgttcccgg
cagctcgttacgttaggcgatctttatgcgtatttaagccgtcactga
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