Cohnella candidum: EAV92_13615
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Entry
EAV92_13615 CDS
T05696
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
coh
Cohnella candidum
Pathway
coh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
coh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EAV92_13615 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
coh03019
]
EAV92_13615 (recQ)
03400 DNA repair and recombination proteins [BR:
coh03400
]
EAV92_13615 (recQ)
Enzymes [BR:
coh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EAV92_13615 (recQ)
Messenger RNA biogenesis [BR:
coh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EAV92_13615 (recQ)
DNA repair and recombination proteins [BR:
coh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EAV92_13615 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
NPR1_like_C
Motif
Other DBs
NCBI-ProteinID:
AYQ73522
UniProt:
A0A3G3JZG2
LinkDB
All DBs
Position
complement(2948683..2950521)
Genome browser
AA seq
612 aa
AA seq
DB search
MEQARAALRTYFGYDSFRQGQEELVGAILEGRDVLGIMPTGAGKSVCYQIPAVLLPGLTI
VVSPLISLMKDQVDALNENGIPAALLNSTLTAAEMNRRYRDIEAGRYRVVYIAPERLESD
RFTEWLGRVEVSLVAVDEAHCISQWGHDFRPSYLSVARLTDRLEPRPVVAAFTATATPEV
REDIAKRLRLQEPLRVTTGYARKNLSFRVVRGGDKRRELLRCLQEHEGEAGVVYASTRKE
VEECHAFLGKQGIRAGKYHAGLEERERADAQDAFLRDDIQVMVATNAFGMGIDKSNVRFV
IHYNLPKNVEAYYQEAGRAGRDGAPGECILLYSPQDTVTQKFLIEQGEGDEERKKTAYRQ
LNDMVQYAFSQECLQQAIVAYFGDTCEPCGKCGNCLDTEERLDVTEAAKVVFACVAGMRQ
RFGVSLTAKVLRGSGEAKIRQFGFDRLPVYGRMSGRSEKDIVGLIQALAAQGYMRVTDSA
YPVVTLTAKVRAVLDGEERVYRRAERSADAEASGGTGYSRSGSGMGSARRGRPADDDLGA
EGEALFAKLKTLRKSLADRENVPPFVIFHDATLREICRVRPTTERALKDVKGIGEAKIAK
YGKAFLDVIREH
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggcgcgggcggcgctgcggacttatttcggatacgactcgttccgccaaggg
caggaggagctggtcggcgcgatcctggaaggacgggacgtcctgggcatcatgccgacc
ggcgcggggaaatcggtgtgctaccagataccggccgtcctgctgcccggactgacgatc
gtcgtgtctccgctcatatcgctcatgaaggatcaagtggacgcgttgaacgagaacggc
attcccgcggcgctgctgaacagcacgctgacggcggcggagatgaaccgccgctaccgg
gatatcgaggccggccgttatcgcgtcgtctatatcgcgccggagcggctggaatcggac
cgcttcacggagtggctgggccgggtggaggtttcgctcgtcgccgtggacgaagcgcat
tgcatttcccaatggggccacgatttccgccccagctatttgtccgtcgcgaggcttacg
gaccgtctggagccgaggccggtcgtggccgccttcacggcgaccgcgacgccggaggtg
cgcgaagacatcgcgaagcgcttgcggctgcaggaaccgcttagggtaacgaccggctac
gcgcgaaagaacctgtcgttccgcgtcgtgcggggcggggacaagcggagggagctgctt
cgctgcctgcaggaacatgaaggggaggccggcgtcgtttacgcttcgacccgcaaggaa
gtggaggaatgccacgccttcctcgggaagcagggcatccgggccggcaagtaccatgcg
gggctggaggaacgggaacgcgcggacgcgcaggacgcgttccttcgcgacgacattcag
gtgatggtggcgacgaacgcattcggcatggggatcgacaaatccaacgtccgattcgtc
atccactacaacctgccgaaaaacgtcgaagcgtattaccaggaagcgggcagggctggc
agggacggagcgccgggcgaatgcatcctgctctattccccccaggacacggtcacgcag
aaattcctgatcgaacagggcgagggcgacgaggaacgcaaaaaaacggcgtaccgccag
ttgaacgacatggtccaatacgcgttcagccaggagtgcctccagcaggcgatcgtcgct
tatttcggggatacgtgcgagccgtgcggcaaatgcggcaactgcctcgacacggaagaa
cggctggacgttacggaagccgcgaaggtcgtgttcgcttgcgtggcgggcatgcgccag
cgcttcggcgtttcgctcaccgctaaggtgctgagaggatcgggcgaggcgaaaatccgc
caattcggcttcgatcggcttcccgtgtacggtcgtatgagcggccgttcggagaaagac
atcgtcggcctcatccaagctctggccgcacaaggttatatgcgggtgacggacagcgct
tatccggtcgtgacgttaaccgccaaagtccgtgccgtgctggacggagaggaaagggtg
taccgccgggcagagcgctccgcggatgccgaagcttccggcggcaccgggtactcccgc
tcgggttcgggtatggggtcggcaagaagagggcgtccggcggacgacgatctgggcgcg
gaaggggaagcgctgttcgccaagctcaaaacgctgcgaaagtcgctcgccgaccgggag
aacgtgcctccattcgtcatattccacgatgccacgctgcgcgaaatttgccgggtccgc
ccgacgacggaacgtgctttaaaggacgtcaaaggcatcggcgaggcgaagatcgcgaag
tacggcaaagcttttctggacgtcatccgagagcattga
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