Cohnella candidum: EAV92_13735
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Entry
EAV92_13735 CDS
T05696
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
coh
Cohnella candidum
Brite
KEGG Orthology (KO) [BR:
coh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
coh03016
]
EAV92_13735 (thpR)
Enzymes [BR:
coh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
EAV92_13735 (thpR)
Transfer RNA biogenesis [BR:
coh03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
EAV92_13735 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
AYQ73545
UniProt:
A0A3G3JZ68
LinkDB
All DBs
Position
2975262..2975855
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AA seq
197 aa
AA seq
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MYMSNLRLFIGVALSPSLTERISPIMDRLASELPFRKWTHPEDLHVTLHFLGDTPEDRVE
AVAKAMEDIAANTEPMDLRLTEPGTFGPPAAPRILWLGLTEPSRQGGLARLQAELAPKLA
EAGCRLEDRPFRAHLTLARQGGAGCTRAAIAAAWQTAAPEAAAKPLEWTADRVTLFLSHL
GKRPSYEKRREFPFRRS
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgtatatgagtaaccttcgcctttttatcggcgttgctctttccccatccctgaccgaa
cggatctccccgatcatggaccggctcgcgtcggagcttccattccgcaaatggacgcac
cccgaggatctccacgtgacgcttcattttctcggggacacgccggaagaccgagtcgag
gccgtcgccaaggccatggaagatatcgccgcgaatacggaaccgatggacctgcgtttg
acagagccgggcacattcggccccccggcggcgcctcgcatcctctggcttggcttgacc
gaaccgtcgcggcagggagggctcgcccggcttcaagcggagcttgcgcctaaactcgcc
gaggcaggatgccgcttggaggaccggccgttccgcgcccatctgacgctggcgcgccag
ggcggtgccggctgcacccgggcggcgattgccgccgcatggcaaacggcggcccccgaa
gccgccgctaagccgctcgaatggaccgccgatcgcgttacgctattcttgtctcattta
gggaaaaggccgagttatgaaaaacggagggagttcccgtttcgccggtcataa
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