Cohnella candidum: EAV92_16505
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Entry
EAV92_16505 CDS
T05696
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
coh
Cohnella candidum
Pathway
coh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
coh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EAV92_16505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
coh03021
]
EAV92_16505
03400 DNA repair and recombination proteins [BR:
coh03400
]
EAV92_16505
Enzymes [BR:
coh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EAV92_16505
Transcription machinery [BR:
coh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EAV92_16505
DNA repair and recombination proteins [BR:
coh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EAV92_16505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RAD51D_N
PASTA
DDE_Tnp_IS1595
Motif
Other DBs
NCBI-ProteinID:
AYQ74023
UniProt:
A0A3G3K0Q6
LinkDB
All DBs
Position
complement(3621378..3622322)
Genome browser
AA seq
314 aa
AA seq
DB search
MIVIEKPKIESVEIQEDKRYGRFVVEPLERGYGMTLGNSLRRILLSSLPGAAATSVQIDG
VLHEFSTIPGVMEDVTEIILNLKRLSLKIHSDEEKILEIDAEGEGVITAGDIRADSDVEI
LNPDLHIATLASGARLHMRISAKQGRGYVPADRNKKEDQPIGVIPIDSIYTPITRVNYQV
ENTRVGQVTNYDKLTLEVWTDGSIWPEEAVSLGAKILTDHLSLFVGLTDEAKDTETMKEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELITKTEEDMMKVRNLGRKSLEEVQ
EKLEELGLGLRIEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtgattgtgatcgagaagccgaaaatcgaatcggtagagatccaggaagacaaaaggtat
ggacgttttgtcgtagaaccgctggaacgtggttatggcatgacgttgggcaattccctc
cgccgtatcctgctgtcgtccttgccgggcgcagccgccacatccgtccagattgacggc
gtgcttcatgagttctccacgattccgggcgtgatggaggatgtcactgagatcatcctc
aatctgaagcgcttgtcgctgaagatccactcggatgaggagaagatccttgaaatcgat
gcggaaggcgaaggcgtcattacggcgggagacatccgcgccgacagcgacgtcgaaatc
ctgaatccggacctgcacatcgcgacgctggcttccggtgcgcgcttgcatatgcggatc
agcgccaaacaaggccgcggatacgttcctgcggaccgcaacaagaaggaagatcagccg
atcggtgtcattcccatcgattcgatctacacaccgattacccgcgtgaactaccaggtc
gaaaacacccgtgtcggacaagtgaccaactatgacaagctcacgttggaagtttggacg
gacggaagcatttggccggaagaagcggtaagcctgggtgcgaagatcctcacggatcac
ctgtcgctgttcgtcggcctgaccgacgaagccaaggataccgagacgatgaaagagaag
gaagaggacaagaaagagaaagtgctcgagatgaccatcgaagagctggatctttcggtc
cgttcctataactgcctgaaacgcgccggaatcaacaccgtgcaagagctgatcacgaaa
accgaagaagacatgatgaaggtccgcaacctcggccgcaagtctttggaggaagtccaa
gagaagctcgaagagctcggattgggcctgcgcatcgaagaataa
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