Cohnella candidum: EAV92_17375
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Entry
EAV92_17375 CDS
T05696
Name
(GenBank) hypothetical protein
KO
K21449
trimeric autotransporter adhesin
Organism
coh
Cohnella candidum
Brite
KEGG Orthology (KO) [BR:
coh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
coh02000
]
EAV92_17375
Transporters [BR:
coh02000
]
Other transporters
Pores ion channels [TC:
1
]
EAV92_17375
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLH
CopC
Motif
Other DBs
NCBI-ProteinID:
AYQ74179
UniProt:
A0A3G3K328
LinkDB
All DBs
Position
complement(3816078..3819035)
Genome browser
AA seq
985 aa
AA seq
DB search
MRDSSYHSSMQDKQMFSRGGEKKVMKKSLSVLLSAAIAFGAFASVASAATPTTALEKFEA
LKAAGIFSGVGASQDPALASKMTRAELARILDLLKGLDVDTKPTTQSFSDVKSSHWAFEE
IEAAKAAGLVVGVGGGKFDPNGNVTVQQIAVAAANVLGLKPVAGATVAGADNWAAGYIQA
LLDNGITLPTTYKAAATREILVTATYSVYEKIAVPAAVEVASVTATGAKKIQVTFNKAVD
TSKATFAVKKGSVAVNLSKAASFSDDKKVATLELATKLTAGDYTVSVSGLTDTALTKTLT
AQDEKVSKIEFASLNAPVDRASNTTIYANIKASNQYGEDVTSQGGFTLSVGKANATYTIS
SAGEIAITSAAGFLKDEKVTVGVLHSASNTFVSGVLVVSDAARASELAITGIYNPNSKTL
EEGADPNDFYLIVDAKDQYGNSVTNTTYLNKDVVITSQNTTVVPQFDQSTASGPFQTKTI
DGVSKIVAQLNKPSGQLLKAGTSKVMLISNFTGKSASYDVNVSENVKVDTITLSQPEVAV
LGEKVKIPFTAIDQFGKEVTDVNKLNAMTRTSTYDSVSSKKLSFVRDYVNNKTELVLDTA
GQTAKNAVISIVTSTFKSYQLNISLVDAAAATVISGINDLDKVYAVGANDTVDLSKVAVK
DQYARAVDMTGKWSGDAGTYRLYVASSDTATVDVVTTGAQAPVTIDGVTYNVLDNAADTF
KLDAKKKGSATITFKLFNLDGTYKEVSSSTYTFSANVVEAADIKDYVVEDAATAYDQAVI
GSVNSKYDVTIPVKGVLADGSKVALPTSFYQLNENDSGASIVGGSALRVYAPDPGTYAAY
GDKDTRDVTVTAVVYAADQTLVVSKTVKASKAASAPDKLALESKNSVVKESDAVVSVDVS
SVSATTPLTNKYATIAGLVNDAVVVTDQYGVEIADPSTWSIYTSNFTKDSNGVAKTYNTV
VAGDSFDVVVITANNKQIKFRVVVK
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgagagattcgagctatcattcttccatgcaagacaaacagatgttttctcgaggagga
gaaaaaaaggttatgaagaaaagtttatccgttcttctgtccgcagctattgcattcggc
gcattcgcgtccgtagcttcggcagcaacccctactacggcgcttgagaaattcgaagcg
ctgaaagccgcaggcattttcagcggcgttggcgcaagccaagatcctgcgctggcatcc
aaaatgacccgcgctgagctggctcgtatcctcgacctgctcaaaggcctggacgttgac
accaagcctacgacccaatccttcagcgacgttaagagctcccactgggcgttcgaagaa
atcgaagctgctaaggctgctggtctcgtagttggcgtcggcggcggcaagttcgacccg
aacggcaacgttacggttcaacaaatcgctgttgctgcagctaacgttctcggcctgaag
cctgttgctggtgcaacggttgccggcgctgacaactgggctgctggttacatccaagca
ctgcttgacaacggcatcaccctgccgactacttacaaagctgctgctacgcgtgaaatc
cttgtaacggctacctactccgtttacgagaagatcgctgtaccggctgcagttgaagtg
gctagcgtaacggcaacaggcgcgaagaagatccaagtgaccttcaacaaagccgttgat
acttccaaagctacgttcgctgtgaagaaaggctccgtggcagttaacctgtccaaagcc
gcttccttctccgatgacaagaaagtggctacgctcgaactcgcaacgaaactgacggct
ggcgattacacggtttccgtttccggtctgaccgacacggctctgaccaaaacgttgacc
gcgcaagacgagaaagtttcgaaaatcgaattcgcttcgttgaacgctccggttgatcgt
gcttctaacacgacgatctatgcgaacatcaaagcgtccaaccaatacggcgaagatgtt
accagccaaggcggctttacgctgagcgttggtaaagcaaacgctacttacacgatcagc
agcgctggcgaaatcgccatcacttctgctgccggattcttgaaagacgagaaagtaacg
gttggcgttctgcactccgcttccaatacgtttgttagcggcgttctggtcgtatccgat
gctgctcgcgcttcggagctggcaatcacgggcatttacaacccgaacagcaagacgctt
gaagaaggcgctgatccgaacgacttctacttgatcgtcgatgctaaagaccaatacggt
aacagcgtcacgaatacgacgtacctgaacaaagacgtcgttatcacgagccaaaacacg
actgttgtaccgcaattcgatcaatccactgcttctggcccgttccagacgaaaacgatt
gacggcgtttcgaaaatcgttgctcaactgaacaagccgagcggccaattgctcaaagct
ggtacgtccaaagttatgttgatttctaacttcacgggcaaatccgcatcttacgatgtg
aatgtttccgagaacgttaaagtcgacacgattacgctgtcccaacctgaagttgctgtt
ctgggcgagaaagtgaaaattcctttcacggcaatcgaccaattcggtaaagaagtgacg
gacgttaacaagctgaacgctatgactcgtacttctacgtacgattcggtttcgtcgaag
aagctgtctttcgttcgcgactatgttaacaacaaaaccgaacttgttctggacacggct
ggccaaactgctaaaaatgcagtcatcagcatcgtaacgagcacgttcaaatcttaccaa
ctgaacatttccttggttgatgctgcagcagcaacggtaatcagcggcatcaatgatctt
gacaaagtttatgcagttggcgctaacgacacggttgacctctcgaaggttgctgtaaaa
gaccaatatgctcgtgctgttgacatgaccggcaagtggtctggcgacgctggtacctat
cgcttgtatgttgcttcctccgacaccgctactgttgacgtagtgactactggtgcacaa
gctccggtaacaatcgatggcgtaacgtacaatgttcttgacaacgcagctgacacgttt
aaacttgatgctaagaaaaaaggttccgcaacaatcacgtttaaactctttaaccttgac
ggaacgtacaaagaagtatccagcagcacgtataccttctctgctaacgtcgtagaagcc
gctgacatcaaagactatgttgttgaagacgcagcaacggcctatgaccaagcggtgatc
gggtccgttaactcgaagtacgatgtaacgatcccggtaaaaggcgttctggctgatggc
agcaaagtcgctctgccgacttccttctatcaactgaacgaaaatgattccggagcttcc
atcgttggcggcagtgcacttcgcgtgtatgcaccggatccgggtacgtatgcggcttat
ggtgacaaagatactcgtgatgtcactgtaactgcagtcgtttatgctgctgatcaaact
ctggttgtcagcaaaacggttaaagcttctaaagctgcttccgcacctgacaaattggct
cttgagtccaaaaacagtgttgttaaggaatccgatgctgtagtatccgttgacgtttct
agcgtttcggctacgactccgcttaccaacaaatatgctacgatcgctggtctcgtgaac
gacgctgttgtcgtaactgaccaatacggcgtagaaattgctgatccgtcgacctggtcg
atttacaccagcaactttacgaaagactccaacggtgttgctaaaacttacaacacggtt
gttgctggcgacagcttcgacgtagttgtgatcacggctaacaacaagcaaatcaagttc
cgcgttgttgttaagtaa
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