Cohnella candidum: EAV92_18015
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Entry
EAV92_18015 CDS
T05696
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
coh
Cohnella candidum
Pathway
coh03022
Basal transcription factors
coh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
coh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EAV92_18015
09124 Replication and repair
03420 Nucleotide excision repair
EAV92_18015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
coh03021
]
EAV92_18015
03036 Chromosome and associated proteins [BR:
coh03036
]
EAV92_18015
03400 DNA repair and recombination proteins [BR:
coh03400
]
EAV92_18015
Enzymes [BR:
coh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
EAV92_18015
Transcription machinery [BR:
coh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EAV92_18015
Chromosome and associated proteins [BR:
coh03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
EAV92_18015
DNA repair and recombination proteins [BR:
coh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EAV92_18015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
Motif
Other DBs
NCBI-ProteinID:
AYQ74295
UniProt:
A0A3G3K156
LinkDB
All DBs
Position
complement(3943246..3945519)
Genome browser
AA seq
757 aa
AA seq
DB search
MPDTVRLSVRALVEYAHRSGDIETTGFRTVGSMTEGSRVHREVQQGYGEQDSKEVFLSSE
IPYGDLLFVLEGRCDGLRVDAERIVLEEIKSTVLDPRHIAENQYPVHWAQAGCYAYLYAK
ANGLPKMRLRLVYVHVDSGERMVYERDASYNELEWEVKASIEAYVPYARMTLEQTRLRDE
SIAGLSFPFPAYRQGQRKLAGAVYKTIEEGVGLFAQAPTGIGKTVSVLFPAIKAVGQGLI
RRFFYLTAKTTTRAAAEDTLSLLRDQGLHLQTVTLTAKEKVCFQEEVRCSKESCPFADGY
YDRINGAILDMLGNETLMTRPVIEEYARKHRVCPFEFSLDAAYAADALICDYNYVFDPRV
SLKRLTGEGKKQAALLVDEAHNLVDRAREMFSAELVKSDFLALQREYKSAYPGVHLAAKA
INGHFIALRKDSGDRHRIWKETPAALLELAEDFVREAELALQQSETAPQPLLDAYFAAQA
FVRVGGMYDERYATYADVTKQDVRLKLLCLDPSELLRQTGKGYRSRVHFSATLTPAAYFM
DMLGAEPDDYGLSVPSPFSPEQWDVSIVPLSTRYADRERSIGPLVRLLKELPSTRPGKYF
FFFPSYDYMNAVYEAFEADGPPFRTLVQQSLMTEEERERFLSAFDEANPETLAGFAVLGG
VFSEGIDMAGDRLNGVVVVGVGLPQLGPEREALKRHFDESGKNGFDYAYVYPGINKVLQA
GGRLIRTETDQGVLVLVDDRYRQARYQRLLPDEWKTD
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgccggatacggttcggctgtcggtccgcgcgttggtggaatacgcgcaccgaagcggg
gatatcgagaccacgggttttaggacggttggctcgatgacggaaggttccagggtccat
cgagaggtgcagcagggttacggggaacaagattcgaaagaagtgtttctgtcatcggag
attccgtatggggatctccttttcgtattggaaggccgttgtgacggcctgagagtggac
gcggaacggatcgtgctggaagagatcaagtccaccgtgctggatccgcggcatatcgcg
gaaaaccaatatcccgtccattgggcgcaagcgggttgttacgcctatctgtacgctaaa
gcaaacggattgcccaaaatgcgcctccggctcgtctacgtgcacgtggactcgggggaa
cgcatggtttacgaacgcgacgcttcctacaacgaactcgaatgggaagtaaaagcgtcg
atcgaggcgtatgttccttacgcgcgcatgacgctggagcaaacgcgtcttcgggacgag
agcatcgccggtctgtcctttccgtttcccgcttatcggcaaggccaacgcaagctggcg
ggggccgtctacaagacgatcgaagaaggcgtcgggcttttcgcccaagcgcctacgggc
atcggcaagacggtatcggtgttgtttcccgcgataaaggcggtcgggcaagggctgatc
cgccgtttcttctacctgaccgccaaaacgacgacccgcgcggcggcggaggacaccctc
tcgctgcttcgcgatcaaggccttcatctgcagacggtcacgctgaccgcgaaggagaag
gtttgttttcaggaggaagtgcggtgcagcaaagagtcgtgccctttcgcggacggctac
tatgaccgcattaacggcgcgatcctcgacatgctcgggaacgagacgctgatgacgcgg
ccggtcatcgaggaatacgcccggaagcaccgggtttgcccgttcgaattttccctggat
gccgcctacgcggcagatgcacttatctgcgattataactacgtcttcgatccccgcgtg
tcgctcaagcggctgaccggcgaagggaagaagcaggccgcgctgctcgtggacgaagcc
cataacctggtcgaccgcgcacgggaaatgttctcggctgagctcgtaaagtccgatttc
ctcgcgctccaacgggagtacaaatcggcttatcccggcgttcatctggcggctaaagcg
atcaacggccattttatcgcgttgcggaaagatagcggcgaccgccatcggatttggaag
gaaaccccggctgcgctgctcgagctggccgaagacttcgtccgggaagcggagctggcg
ctgcagcaatcggaaaccgctccgcagccgcttctcgacgcttatttcgcggctcaggca
ttcgtccgggtgggcggcatgtatgacgagaggtatgcgacatacgccgacgtcaccaag
caggatgtccggctgaagcttctctgcctggatccctcggagctgcttcgccagacgggc
aaagggtaccgttcccgcgtccatttctccgcgacgctgacgccggccgcctattttatg
gacatgctgggcgcggaaccggacgattacgggctgtccgttccttccccgttctccccg
gagcagtgggacgtatcgatcgtgccgctctcgacccgctacgcggaccgcgaacgatcc
atcgggccgctggtccggctgctgaaggaactgccgtccacacgtcccggcaaatacttc
tttttcttcccgtcctacgactacatgaacgccgtttatgaagctttcgaagcggacggc
ccgcctttccgcacgctcgtgcagcagtcgctcatgacggaagaggagcgggaacgtttc
ctatcggcctttgatgaggccaatccggaaacgctggccgggttcgcggtgctcggcggg
gtattctccgaaggaatcgacatggcgggggaccggctgaacggcgtcgtcgtggtcggc
gtaggccttccccagctggggccggagcgggaagcgctgaagcgccattttgacgagtcg
ggaaaaaacggctttgactacgcctacgtgtatcccggcatcaacaaagtgctgcaggcg
ggaggaaggctcatccgcacggaaacggaccagggtgtgctcgtcctggtcgacgatcgt
tatcggcaagcgcggtaccaaaggctgctgccggacgagtggaaaaccgactaa
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