Cohnella candidum: EAV92_18665
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Entry
EAV92_18665 CDS
T05696
Name
(GenBank) helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
coh
Cohnella candidum
Pathway
coh03420
Nucleotide excision repair
coh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
coh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EAV92_18665
03430 Mismatch repair
EAV92_18665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
coh03400
]
EAV92_18665
Enzymes [BR:
coh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EAV92_18665
DNA repair and recombination proteins [BR:
coh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EAV92_18665
MMR (mismatch excision repair)
Other MMR factors
EAV92_18665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
SLFN-g3_helicase
AAA_30
AAA_16
NACHT
DEAD
Peptidase_M16
nSTAND3
ResIII
Zeta_toxin
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
AYQ74414
UniProt:
A0A3G3K1J0
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All DBs
Position
complement(4071946..4074336)
Genome browser
AA seq
796 aa
AA seq
DB search
MIDEKDWNQEQERLDEVTEKLQARITELEPEVTGLQEQAGDIRKRFWEEVTVNTASDEDF
EETFYSIKQQEALLSERERSYRLRKQQWKSMNRLLVSPYFGRIDFNEDGLGREQVYIGVA
SFVDSDGMDFLIYDWRTPIASMYYDYSPGPAAYDTPGGRVTGKMELKRQYQIREGRLLNV
FDTSITIGDELLQQALGQGADAQMKSIVATIQKEQNAIIREDKSRMLIVQGAAGSGKTSA
ALQRVAYLLYKHRDQLRADQIVLFSPNPMFNSYVSTVLPELGEENMQQTTFQEYLEHWLG
SAFRVEDAFDQIEFVLSEPSRPGYEARLQGMAYKASSAFLQALQNYARRLEQEGMRFNSI
RFRDRDLISAARMKSQFYGYDPSIRLANRVAMLQEWLLKELVSLERKEREEPWVQDEMNY
LDNEQYAEVHKQLHKERGVFDFAERYEEIQERLNDKPRRDESDFDYAEREEELLRRMIVK
EQFQPLRRSVKRMSFIDMPGLYVQLFGDQDAYRTMTQEAEIPALWPEICEQTQEKLGRFE
LFYEDATPYLYLKELVEGVRVNTEVRHVFVDEGQDYSMFQYEFLKKLFPRARMTVLGDFG
QAIFTQATELHGAESPLIRLYGESETSLVRLIRSYRSTREIVEFTKSLLPGGKEIVPFER
SGEKPLLMQADSEEERFARIAEAVAALRAEGFASVAVITKTAAESREAYERLTAQGCQGL
KLVTKTTPTFDKGTLVIPAYLAKGVEFDAALIYEASERTYRRESERKLFYTACTRAMHRL
HLYAAGEWTPFIPALN
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacgaaaaggattggaatcaggaacaagagcgcctggacgaggtgacggaaaag
ctgcaagcgagaatcaccgaactggagcctgaggtgaccgggctgcaggaacaggcgggg
gacatccgcaagcggttctgggaagaagtaacggtcaacacggccagcgacgaggatttc
gaggagacattctacagcatcaagcagcaggaggcgttgttgtcggagcgggagcgcagc
taccgtctgcgcaagcaacagtggaaaagcatgaaccggctgttggtgtctccttacttc
gggcgcatcgattttaacgaggatggcttaggccgtgagcaggtctacatcggcgtagcg
tctttcgtggattcggacggcatggactttctcatctatgactggcgtacgccgatcgcg
agcatgtactacgactattccccgggaccggccgcctacgatacgccgggtggacgcgtc
acggggaagatggagctgaaaaggcagtaccagatccgcgagggccggcttctgaacgtg
ttcgacacgagcatcacgatcggcgatgagctgcttcaacaggcgctcggtcaaggcgcg
gacgcccagatgaagagcatcgtggcgaccatccagaaagagcagaacgccatcatccgg
gaagacaaaagccggatgctcatcgtgcagggggcggccggcagcgggaaaacctccgcg
gccctgcaacgggtcgcgtacttgctgtacaaacaccgcgatcaactcagggccgaccaa
atcgtgctgttctcgccgaaccccatgttcaacagctacgtctccaccgtccttcccgag
ctgggcgaagagaacatgcagcagacgaccttccaggaatacttggaacattggcttgga
tccgcatttcgggtagaagatgcgttcgatcagatcgaattcgtgttgtcggaaccgtcc
agaccgggatatgaggctcggctgcaaggaatggcctacaaagcgtcctcggcgtttctt
caagctctccaaaattacgcgcgtaggctggagcaggagggaatgcggttcaatagcatc
cgttttcgggaccgcgatttgatcagcgccgcccggatgaaatcgcagttttacggctac
gatccttccatccgcctggcgaatcgggttgccatgctgcaggaatggctgctgaaagag
ctggtctcgctggagcgtaaggaacgggaggagccgtgggtacaggatgagatgaattac
ctcgacaacgagcagtatgccgaggtgcataagcagctgcacaaagagcggggcgtcttc
gacttcgccgagcggtacgaagaaatccaagagaggctgaacgataagcctcggcgggac
gagagcgacttcgactacgccgagcgggaggaagagctgctgcgccgcatgatcgtcaag
gagcagtttcagccgttaagacgaagcgtgaagcgcatgtctttcatcgatatgccaggg
ctgtacgttcagctgttcggcgatcaagacgcgtatcggacgatgacgcaggaggccgag
attccggcactttggcccgagatttgcgagcaaacccaggaaaagctaggccgattcgaa
cttttctatgaggatgcgacaccgtacctgtatttaaaagaactcgtcgagggcgttcgg
gtgaacacggaagtgcggcacgttttcgtcgatgagggccaggattattcgatgttccag
tacgaatttctcaaaaagcttttcccccgcgcccgcatgacggtactcggcgatttcggt
caggcgatctttacgcaggcaacggaactgcacggcgcggaatcgccgctcatccggctc
tatggcgagtcggaaacgagcctggtccgtctgatacgcagttatcggtccacccgcgag
atcgtcgagttcacgaagtcgctgctgccgggcggtaaggagatcgttcccttcgaaaga
agcggggagaagccgctccttatgcaggcggatagcgaagaggaacggttcgcacgtatc
gccgaggcagtggcggcgcttcgcgcggagggcttcgcctccgtggccgtcattacgaag
acggcagccgagagccgcgaggcctatgaacgcttgactgcccaaggatgccagggtttg
aagctggtgacgaagacgacgccgaccttcgacaaggggacgctggtgattcccgcgtat
ctcgcgaagggcgtggaattcgatgccgcgctgatctatgaggcttctgagcggacttac
cgtcgggaaagtgagcgcaagctcttctatacggcatgcacgcgcgcgatgcatcggctt
cacctttatgcggcgggggaatggacgcctttcattccggctttgaattaa
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