Cohnella candida: EAV92_19590
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Entry
EAV92_19590 CDS
T05696
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
coh
Cohnella candida
Brite
KEGG Orthology (KO) [BR:
coh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
coh03032
]
EAV92_19590 (gyrB)
03400 DNA repair and recombination proteins [BR:
coh03400
]
EAV92_19590 (gyrB)
Enzymes [BR:
coh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
EAV92_19590 (gyrB)
DNA replication proteins [BR:
coh03032
]
Prokaryotic type
DNA Topoisomerases
EAV92_19590 (gyrB)
DNA repair and recombination proteins [BR:
coh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EAV92_19590 (gyrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
PEPcase_2
LRR_F-Box-like
Motif
Other DBs
NCBI-ProteinID:
AYQ74578
UniProt:
A0A3G3K281
LinkDB
All DBs
Position
4247917..4249839
Genome browser
AA seq
640 aa
AA seq
DB search
MSVNSQQNTYDESQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVWEVVDNSIDEALAGYC
DKIDVLIHEDNSVTVIDNGRGIPVGEHPKMKRPTLEVVLTVLHAGGKFGGEGYKVSGGLH
GVGVSVVNALSEQVIVTVKRGGEIHQQEYRRGVPQYDVKLIGTTDENDTGTTVKFKPDSE
IFTETTVYEYDILVGRIRELAFLNKGIQISLTDERSGVSETFKYDGGIKEFVQYLNRTRE
ALHEQPIYVEGTKDYIACEIALQYNDSYTENIYSFANNINTHEGGTHESGFKSALTRIIN
DYSRKMGFVKDNESNLTGDDVREGLAAIISVKIPEPQFEGQTKTKLGNSEVRGIVESLLA
EKLMEFMDENPSVARKVIDKSLSAARAREAARKARELTRRKSVLEVSALPGKLADCSSKD
ASISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNLEIRAIITAL
GTGIGDDFDLSKARYHKICIMTDADVDGAHIRTLLLTFFYRYMRKLIEAGYVYIAQPPLF
KIERNKVVRYAQSERERDQIIAEFGEGTKINVQRYKGLGEMNAEQLWETTMDPDSRTMLQ
VRIEDAMQADMIFDTLMGDNVEPRRDFIQQYAKSVKNLDI
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgtgaattcgcaacagaatacgtatgacgagagtcagattcaggtattggaaggc
ttggaggccgtacgcaaacgccccggcatgtatatcggttccacgagctcccgcgggctt
caccatctcgtatgggaagtcgtcgacaacagtatcgacgaagccttggcgggttattgc
gataaaatcgacgtcctcatccatgaagacaacagcgtgacggtcatcgataacggccgg
ggcatcccggtcggcgaacatccaaaaatgaaacgtccgacgctcgaagtcgtccttacg
gtgttgcacgcgggcggcaagttcggcggcgaaggctataaagtgtccggcggtctccat
ggcgtcggcgtatccgtcgtgaacgctctctccgagcaagtcatcgttacggtcaagcgc
ggcggagagattcaccagcaagaataccgccgcggcgttccccaatacgacgtcaaactg
atcggcaccaccgacgagaacgataccggcacgaccgtcaagttcaaaccggattcggag
attttcacggagacgacggtttacgagtacgacatcctcgtaggccggatccgcgagctg
gcgttcctcaacaaggggatccagatttcgctcaccgacgaaagatccggcgtcagcgag
acgttcaaatacgacggcggtatcaaggagttcgtgcagtatttgaaccggactcgcgaa
gcgctgcacgagcagccgatctacgtcgaaggtacaaaggactatatcgcgtgcgaaatc
gcgctgcaatataacgacagctacaccgaaaacatttactccttcgcgaacaacatcaac
acgcacgagggcggaacgcacgaatccggtttcaagagcgccttgacgcggattattaac
gattattcccgcaagatgggcttcgtgaaggacaacgaatcgaacctgaccggcgatgac
gttcgggaaggcctggccgcgattatctcggtcaaaattccggagcctcagttcgaaggc
cagacaaagacgaagcttggcaacagcgaagtccgcggaatcgtggaatctcttctcgcc
gagaagctgatggagttcatggacgaaaatccgtccgtggcccgtaaggtcatcgataag
tccctttcggccgcacgggccagggaagctgcgcgtaaagcgcgggaattgacccgccgc
aaaagcgtgctcgaagtgagcgctttgccgggcaaactggcggattgctcctccaaggac
gcttccatcagcgaactgtacatcgtcgaaggcgactccgcgggcggttcggccaaacag
ggccgggatcggcacttccaggcgatcctgccgctgcggggcaaaatcctcaacgtcgag
aaagcgcgactggacaaaattttaagcaatctcgagatacgcgcgatcattaccgcactc
ggcaccggcatcggcgacgatttcgacttgtccaaggcgcggtaccacaaaatctgcatc
atgaccgacgccgacgtcgacggcgcgcacattcgcacgctgctgcttacgttcttctac
cgctacatgcgcaagctgatcgaagcgggttacgtgtatatcgcgcagccgccgttgttc
aagatcgaacggaacaaggtcgtccgttatgcgcaatcggagagagaacgcgaccagatc
atcgccgagttcggcgaaggcacgaagatcaacgtccagcgttacaaaggcttgggcgag
atgaacgcggaacagctgtgggagacgacgatggatccggacagccgcacgatgctccag
gtgcggattgaggacgccatgcaggcggacatgattttcgatacgctcatgggcgacaac
gtcgaaccgcggcgcgatttcatccaacagtacgcgaaatccgttaagaatctcgatatc
taa
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