Cohnella candidum: EAV92_22685
Help
Entry
EAV92_22685 CDS
T05696
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
coh
Cohnella candidum
Brite
KEGG Orthology (KO) [BR:
coh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
coh03000
]
EAV92_22685
Transcription factors [BR:
coh03000
]
Prokaryotic type
Helix-turn-helix
Other families
EAV92_22685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PrpR_N
HTH_8
HTH_24
Sigma54_activ_2
HTH_psq
Hydrolase_like
Sigma70_r4
HTH_23
Sigma54_activat
Motif
Other DBs
NCBI-ProteinID:
AYQ75108
UniProt:
A0A3G3K3S0
LinkDB
All DBs
Position
4892224..4894008
Genome browser
AA seq
594 aa
AA seq
DB search
MKVLVVAPYPGLGELIRQMTPQYEGFDIQVIVADMQESLDQIGSFGEGGYDVVISRGGTA
RLLAMHAKVPVVEIQVSGFDVLRMLTLMKEHQAKIRLIGFPNIIQSFVSVSNLLDYDFPY
TVINGESEVENALVEAKRDGVQVIVGDTVTVRFANELGMQGVLITSGRESVSEAFRTAEL
IFRSLDEHKKTNRIYERMLKEIGREAAVLDGSLQVLFATDGIQSLWGKRSGQTSFPYRVE
EGGLLGGLLEDAAADIRENGPLTLYEPARRITLTVRLLNAADRSEIYLLTLEHGEHPWAG
IRVVDPNRDADTFPSFFHATGVMDQTLQNAKSQVQAGDPVAVCGEHGAGKRIFADALAAL
MGKDVRVIEVEIGDGDEAAFRRLCHLVSVAERGALLHVRGFERFPAVLQRKIADIIKGKT
RKVLFSFDEHPKRLKLEIRMDAKVLDWLSRGAIELKPLRERLNELEEYVRAFISMFNEKY
GKQIVGVRPEVWELLRARTWPGNLIELRDTMEEAVREAQGEYIERVDVEMKADAAVTPVL
SAGIPAFDLNRSLDEIERDIIRYVLEEEGMNQSKAAKRLKINRTTLWRKVKGEE
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgctggtcgtagcgccctatccaggattgggcgaattgataaggcagatgacg
ccgcaatacgaagggttcgatatccaggttattgttgcggacatgcaggaaagtttggat
caaatcggttccttcggggaaggcgggtacgatgtcgtcatcagccgcgggggcacggcc
cggctgttggcgatgcacgccaaggttccggtcgtggagattcaagtatccggattcgac
gtgctccggatgcttacgctgatgaaagagcaccaggccaaaatccggctgatcggattt
ccgaacatcatccagagcttcgtgtccgtatccaacctgctggattacgattttccttat
acggtcatcaatggtgagagcgaagtcgaaaacgcgctggtagaagcgaaaagagacggc
gtgcaagtcatcgtgggcgataccgtcaccgtgagattcgcgaacgaactgggcatgcaa
ggcgtgcttatcacgtccggccgggaatcggtgtccgaagctttccggacggccgaattg
atcttccgttcgctggacgaacataaaaaaacgaaccggatttacgagcggatgctgaag
gaaatcggccgcgaggcggcagttctggacggatccttacaggttctctttgcgaccgac
ggcattcaatccctatggggaaagagaagcggccaaacctcttttccttatcgtgtggaa
gagggcggattgttgggcggactgctcgaagacgctgcggcggatatccgtgaaaacggg
cctttaaccttgtacgaaccggcacggcgtattacacttaccgttcgtcttctgaatgca
gccgatcgatcggaaatctaccttctgaccttggagcatggtgagcatccgtgggccggt
attcgggtggttgatcccaaccgcgatgcggatacgtttccttccttctttcatgcaacg
ggggtcatggatcaaaccttgcagaacgcgaagagtcaggtgcaggccggcgatcccgtt
gccgtatgcggggaacatggggcgggcaagcgcatatttgccgacgctctcgcggctttg
atgggtaaggatgtccgcgtgatcgaggtcgaaatcggcgacggagacgaagcggctttc
cgcagattgtgccatttggtttccgtggcggagcggggggcgttgctgcacgttcggggt
ttcgagcgattccccgcggtcctgcaaagaaaaatagctgacatcatcaaggggaaaacg
cgcaaagtccttttttcgttcgacgaacatcccaaacgcttgaaactcgaaatccgaatg
gatgccaaggtgttggattggctttcccgaggcgctattgagttgaagccgcttcgcgag
cggctgaacgaattggaggaatacgtccgggcgttcatttccatgttcaacgagaaatat
ggaaagcagatcgtgggcgttcgtccggaggtttgggaattgctgcgtgcgagaacgtgg
ccggggaacctgatcgagcttcgggatacaatggaggaggccgtacgcgaagcgcaaggc
gaatatatcgaacgtgtcgatgtggagatgaaagcggacgccgcagtaacaccggtcctc
tccgccgggatcccggcattcgatttgaaccggtcattggacgagatcgagagagacatc
attcggtatgtgttggaagaggaaggcatgaatcagtcgaaggccgcgaaaaggctcaaa
attaatcgcacgacgctgtggcgcaaagtcaaaggcgaagagtga
DBGET
integrated database retrieval system
