Cohnella sp. LGH: J4772_00655
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Entry
J4772_00655 CDS
T10185
Name
(GenBank) RHS repeat protein
Organism
cohl Cohnella sp. LGH
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
Cu_amine_oxidN1
DUF6531
Motif
Other DBs
NCBI-ProteinID:
QTH43039
LinkDB
All DBs
Position
158198..167968
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AA seq
3256 aa
AA seq
DB search
MNNLVGPKQQYNTMLSPVYLQNNKLEEYISPQNGELTLTQRDYVLPGRNGLDLEIKRIYK
NDTSNVQEMKVKYLNGAWVDYVSSDIKTSSFNEERYNLGIGMRFSFPMIEVRQNSDGTST
DFLHTQSGDVYRLKADTLAGASVLLPEGQTIKDVVVRTSTAFSNGQNDGTSKFMMTEKEG
KKTYFAADGRILGIVDRYGNTIKFEYTTLSYTIDGQQINKRLISQITDTIGRVTTIEYKE
DSSFTVGPIESPPYSASDSYKASQNPNNTDSGELQGKFQVVVRLPGNKQIVYDKSAVLVS
SSKHVMRTRLQRVFDVDNNVKYHYWYEQPELGFTYMNGKDYAVYNRYENLVQIDYTQTNR
IKRYVYNTYTKRLSSGSMQYRKVFEAEDRIKKSYDASKSGFLDRFVTEIQNKTGYSYTNE
PDGFGISGYNEYNTTYLKDTYRYSTQIKELNGATTTNTYDGLHQLVTKENKGNDHSETTT
TEHDEMKLIKKKETVSLQVADGKAQGASVKKIENYRYDEYGNLTNYTGPEASRDANGYPL
DSKHTVVYTYAYDKFHVLTSKTWNKDKSTTSQILYDVDSKGNVIKETKVNVGDAANWTTT
DYQYDSYGNMTQKRQNASGQSFVTNYEYGIDANGKDTKGAYLSKKYTVVDGTPLTNTYAY
DFDTGNLTVEMDPNGNRTIYEYDALSRVVQNSLPDGSLKKYDYQESPYANMKIQYMDPKG
ANFIYIYDILGNLLQSGLQADGQMRLLATYEYDAKGNKTKETDANGNSILYAYDSAYGLV
RKTYKEKDTVDKGSIVVKYTILTDSNTPLLVTITDQDGYANKYYYDILNRLVKLEKTPDN
NQFFATAYSYNFVGDLLSETDARGGVTRYEYDNQGKRIKKIDALGNETRYVYNALNQISQ
QTEPGGRVTRVLYDTAGRQSEQRVHENDSSDYIYTKYIYDAAGNATQVKQGQNLRGQDIV
ASDVSYAYDNMNRKSDEYHKIDANRKSHIRYSYDSNGNKTQEFRYADAGEKEFLVYTYDY
DYAGRVKEESGTLRASGGGSDDDVHGSYNKKYIYDDVGNLIEQLIDNGNGYDSTTYTYDY
LNHVVEKKESFTDSSPFKYTTYKYDKRGNQISATMTVQGQAATVSIAYDGLGRQTSMIDP
LGNMTRFVYDENGNLIKKIDPRYMSQSADQAPGIEYVYDVLNRLVKTSVYDGSARMVTNY
REYDGRGNLTLDADGEGYNESNPAQSVGKKYVYNILDKQTAYTSAQTAEKNRMNGTHTVS
AAYTYDAIGNVLSQTDALGNRTTNIYYLNGTLQETLYPDGKKELYDYDLTGKIQATKTDR
AGHATTVYNTVFGQPYSIKYPDGTSKSLKYSSKGELTESVDQAGNRTLHTYDPSGNETAR
REFIRTDGAYDVYKLTHKVYDEANRLIAQETLEARTSRSGSGETAVSSGDKVQYAYDKAG
RLTRVSGPFGREINYEYDRAGNRITEKQKVTDSYTDVKRYAYDVQARLISESTLVQTSGL
EMQVLAGAKFDNEYADRVLSTTSYTYYKNGLISGKTDPNGNKTTFIFDADGKLTKQTDPL
LAATEYRYDANGNLIEQVDANGVSTRYEYDGLNRLIRQITPAADGSDATTRYLYDAMGNL
IKQIAPNQYDPAKDTVDQALTMPGISYIYDSMNRWIATVSPDGDGLSYIRYDANGRVQKT
VDGLRYTGNMDASQGIVYEYDGLGRLVKETDALGSITLYAYDVLGRLIRQTDANSNKTVY
EYNPDGTLKAVTYADGGGVSLGYDKLGRKTVETDQRGSKTTYTYNGLGKQRTVTDPYGNT
QEFKTDLSGNVVSQKDKRGSVTLFKYDANHRMVEKRTPLEFDAGGNVVYAIETTVYDKVG
NVIKQAMTSSRDKSFIRETRYAYTDNNLALTVSDNGGAYTKYTYDKNGNVVKKETLRDKD
LYDVEEFSYDNQDRKIADIRLVDEQDIAAATSMANIAALRDPAYPGRIRLITGYEYDLLG
NKIKQIDPRAYAFAAGDADNRNRYAITYTYDALNRVDKIVRKQDGQDVYTQYTYDKVGNK
TAMRNERGFVTTYAYDSMNRQIMVTDSLEQSVTTQYDTAGNRIAVTNAKGDTMSFTYDKL
NRLVNTTDAYGTVINVNVYDANGNVIKKIDAKGYLSASNDTARYGTLYTYDLANRLIQTV
DPELAAKNNSALFKAVYRYNAAGEQTEEIDAFGNKTTFGYDAAGRLVQVTDPLGIATRYG
YDSIGNKLYMTDGRGKTTQYAYGAFGLLTQVTNADRKTIQYSYDLGLNLAVMIDRNGNHT
RYTYDNRDQLLTKTVDETDDRISYTYDEKGNRASMTDASGTSSYSYDSNDKLLKVVKNGS
AQLTYTYDAVGNVSTVTDQTGFVTTYTYDKSNRMSTVIFNGKTVAYAYDPNGNRTSISYE
GGVKESYTYDKNNQLLTLTNQAPSGSVISQYSYTYDYVGKQLSKTDGLGTTNYLYDAAGR
ILEVEAPGKTTIYAYDGAGNRQTLNETYASDQLSGYVDPNTKQAMPYRLMKSQYVYSNAN
ELLKLVETMYDENNKEVLKKTTDYLYDNNGNQLRAKVSFVLPYSSSKRQVTDGSLFGDGV
TGDISALIESVSNTFDGFNRLVKTEKVKGGDRSTITFAYDGNDLRTQKVSRSSKDGYTAQ
VTNYVYDRQHVLLETDAAGDSAVRYVHGINYIARIDATSKLSYYLFNGHGDVVQTVSEAG
TVENQYDYDIFGNPTLTIEVYAASIRYAGEFFDTETGLYYLRARYYDPYVGRFISEDTYE
GKINDPLSLNRYTYAHNDPIMYVDPTGHAVVQLRDLAAATGSTVSWNQKTGTATVTLSSG
VSVQFNTKDDKEKGFSLQNGRIVIDNEEFDRRMTKSYSESKNPMTGGRVEVVSKVDTAVG
DNKLIGYASVTKTYYAPESQQKSSISGVKPIILPMVVQEKERVAVVDLTTHKSDSIDLAS
GKGLTKKNEVLIKNIVSGSEGTVSRAQAALITLLIGQDNSHFSEYMQEKYSGSYLGDNMQ
SSDRYFVSNHASNEIMENGKISLKAFERGLKKYYHQAFQEATEQDYQNYVKTLNQAHSGD
MVDVLNAYFSKEALLYGGYFQELALSEIGWAMMFRSSGFSISKGVVRFAPKPQVPGAGNF
LSNPATKNGTLNIGAGGKPIEGAYNIDLAPKAQGVYTGDATNLSNIKTGSQSKIYIENPY
GYDPLNSEILRVLSQDGEVIITGSRSNMDKLMKTLDSKGLTIKGERVEIPNDGSFKTTTG
GNIKSTMLDQYTIVRK
NT seq
9771 nt
NT seq
+upstream
nt +downstream
nt
ttgaataacttagttgggcccaagcagcaatacaacacgatgctgtcgcctgtatatttg
caaaacaataagctggaagagtatatcagtcctcagaatggcgagttgactttaactcag
agagactatgtgctgcccggacgtaacggactggatttagagatcaagagaatctataaa
aatgatacttccaacgttcaggagatgaaggtcaaataccttaacggcgcatgggtggac
tacgtttcttctgatatcaagacttcctcttttaatgaagaacgttataatctcggcatc
ggcatgcgcttctccttccccatgattgaggttcgacaaaactccgatggaacgagcacc
gactttctgcatacacagagcggcgatgtctatcgtttgaaagccgatacgctggcggga
gcatccgtactactgcctgaagggcaaaccattaaggatgtcgtggtaagaacctcaaca
gccttcagcaatgggcagaacgacggtacatccaagttcatgatgacagagaaggagggg
aaaaagacttatttcgcagcggacggccggattctaggcattgttgaccggtacggaaac
acgatcaagtttgaatatacaactctctcttatacgatcgacggacaacagatcaataag
agattgatttcccaaatcacggatacgatcggtagagtgacgacaatcgaatacaaagaa
gattcgtcttttaccgttggcccaatcgagagtcctccttacagcgcaagcgacagctac
aaagcgtctcaaaatccgaataacaccgattccggggagctgcagggcaagttccaggtt
gtcgtccgtctgcccggaaacaaacaaatcgtatacgacaaatcggcggtgctagtcagc
tcgtccaagcatgtcatgcgcacaaggctgcaaagggtttttgatgtagataacaatgtg
aaatatcattattggtatgagcagcccgagcttggttttacctatatgaacggcaaggat
tacgccgtgtacaaccgctatgaaaatttggtgcagatcgattatacccaaacgaaccgt
atcaagcgctatgtttacaatacatacacgaagaggctgagctcggggagcatgcagtac
cgtaaagttttcgaagccgaagatcgaattaaaaaaagctatgacgcatccaagagcggc
ttcttagaccgtttcgttacggaaatccaaaacaaaaccgggtacagctatacgaacgag
ccggacggattcggcatctcgggatacaatgaatataatacaacctatttgaaggatacg
tatcgttattctacgcagatcaaagaactgaatggagctacaacaaccaacacgtatgac
ggattgcatcaactggttacgaaggaaaacaaaggaaacgaccatagcgagacgacgact
accgaacacgacgagatgaagctaatcaaaaagaaagaaacggtatcgctgcaggtcgcg
gacggcaaagcacaaggtgcgtctgtgaaaaaaattgaaaactaccgctatgacgaatac
gggaatttaaccaactatactggtcctgaagcttcgcgggatgcgaacggctacccgctc
gacagcaagcataccgtggtttatacgtatgcttatgacaaatttcacgtcctcacatcg
aagacctggaataaagacaagagcaccacttcgcagattctttacgacgtcgacagtaaa
ggcaatgtcatcaaggaaaccaaggtaaacgtcggagacgctgcaaactggaccacgacg
gattatcaatatgacagctatggcaacatgactcagaaaaggcagaacgcgagcggccaa
tcctttgtaacgaattacgaatacggcatagatgcgaacggcaaggatacaaagggagca
tacttgtcgaaaaaatacaccgttgtcgacgggaccccgttgactaatacctatgcctat
gatttcgatacgggcaacttgacggtagaaatggatccgaacggcaaccgaaccatctat
gagtatgacgcgcttagcagagtggttcaaaacagcctgccggatggatctctcaaaaag
tatgattatcaagagagtccttacgccaatatgaaaattcaatatatggatccgaagggc
gccaacttcatttatatctatgatattttggggaatctgttgcaatccggattgcaagca
gacggccagatgcgcctgttagctacttatgaatacgatgccaaaggcaacaaaaccaaa
gaaacggatgcgaacggcaatagcatcctgtatgcgtatgatagtgcgtatggacttgtt
cgtaagacatataaggaaaaagacacggtcgataaaggctctattgtcgttaagtacaca
atattgaccgacagcaacactccgcttctcgtcactattacggatcaggacgggtatgcg
aacaaatactattacgacattctgaatcgactggtaaagctggaaaagacgccggacaac
aatcaatttttcgctactgcatactcgtacaattttgtgggagacttgttgtccgaaact
gacgccagaggcggagtaacccgctacgaatatgataatcagggcaagcggataaagaag
atcgatgcgctcgggaatgaaacccggtatgtctacaatgctctgaatcaaatttcacag
caaacggagccggggggtagagttacccgagtactatatgatacagcaggtcggcagtct
gaacagagagtgcacgaaaatgattcgtccgattatatctacacaaagtatatttacgat
gctgcaggcaacgccactcaggtcaagcaaggacaaaatctgcgcggacaggatattgtc
gcttccgacgtttcctacgcgtacgacaatatgaatcgtaaatccgatgaatatcacaaa
attgatgctaaccgtaagtcacatattcgttatagctatgactcgaacggcaataagacg
caggagttccgttatgcggatgcaggagaaaaagagttcctcgtctacacgtacgactac
gactatgccggccgcgtcaaggaagaaagcgggaccttacgggcatcgggcggcggcagc
gatgacgatgttcatgggagttataacaaaaaatacatttacgatgacgttggcaacctt
atagaacagcttatagataacggcaatgggtacgactcgactacctacacttatgattat
ctgaatcacgtagtcgagaaaaaggaatcttttaccgatagcagtcctttcaaatatacc
acttataagtatgacaaacggggcaaccaaatctcggcaacgatgacggttcagggacag
gcggctacggtatccattgcatacgacggtctgggaagacaaacgagcatgatcgatccg
ctcggtaacatgacccgattcgtgtatgacgagaacggaaatctgattaaaaaaatcgat
ccgcggtacatgtctcaatccgcggaccaagcgcccggaatcgaatatgtctatgacgta
ctgaaccgtttggtgaagacctctgtctatgacggcagcgcacgcatggtaacgaattac
agagaatatgatggtagaggcaatctgactctagatgcggatggagaaggatacaacgag
agcaacccagcccaatctgtagggaaaaagtacgtttacaatattctcgacaaacaaacc
gcctacacgtcggcgcaaacggcggaaaaaaatcgaatgaacgggacccatacggtgtcg
gctgcgtatacgtatgatgctattggcaacgtgctatcgcagacggacgcgctgggaaat
cgaacaacgaacatctattatttgaatggaacgctgcaagaaaccttgtatccggacggc
aagaaggagctttacgattacgatctcacgggcaaaatccaggcaaccaagacggatcgg
gcaggtcatgcaacgacggtttacaataccgtttttgggcaaccctacagtatcaagtat
cctgacggcacctctaaatctttaaaatattcatcgaaaggggaattgacggaaagcgtc
gaccaggcaggaaatcgaaccctgcacacctacgatccttccgggaacgagacggccagg
agggaatttatccgtacggacggcgcctacgatgtctacaaactgactcacaaagtgtac
gatgaggcaaaccgcctgattgcgcaggaaacattggaagccagaacatcgcggagcggc
agcggcgaaacggccgtatcctccggagataaggttcagtacgcttatgacaaggcgggg
cgcctaactcgcgtttccggtccattcggaagggaaatcaattacgaatacgatcgagca
ggcaaccggataacggaaaagcaaaaagtaaccgacagctatacggacgtcaagcgatac
gcttacgacgtgcaagctcggctcatcagcgaatcgacgttggttcaaacttccggcttg
gaaatgcaggttttggcgggggccaagtttgacaacgaatatgcggatcgggtactgtcg
acgacttcgtatacgtactataagaatggtctaatcagtggcaaaacggaccctaacggg
aacaaaaccacgtttattttcgatgcagatggaaagctgacaaaacagaccgatccgctg
ctggcggcaaccgaatatcgctatgatgccaacggtaatctgattgagcaagttgatgca
aacggcgtttccacacgctacgaatacgatgggctgaaccgtctgatccgacaaattact
cctgcagcagacggatctgacgctacaacccgttatctgtatgacgctatgggcaattta
atcaagcagatcgcgccgaaccagtatgatccggctaaggatacagtcgatcaggcgctg
acgatgcccggaatttcctacatttatgatagtatgaatcgctggattgctacggtttct
cccgatggagacgggctgtcgtatattcgctacgacgccaacggtcgggtacaaaagacg
gtagacggtttacgttacacaggaaatatggacgcatcgcagggcatcgtctacgaatat
gacggactaggccggctcgtcaaggaaaccgatgcattaggcagcatcaccttgtatgcc
tacgatgtactgggccgtctgattcgtcagacagacgcgaacagcaacaagaccgtctac
gagtacaatccggacggcacgttgaaggccgtcacctatgcagatggcggcggggtttcg
ttaggctacgacaaactgggccgcaaaaccgtggaaaccgatcaacgcggcagtaagaca
acgtatacttataacggtttaggcaaacaaagaacggttaccgatccttatggaaatacg
caagaatttaaaaccgatctgtcggggaacgtggtttcccagaaggacaagcgtggcagc
gtcacgttgttcaagtatgatgccaatcatcggatggtcgaaaaacgaacgccgcttgag
ttcgatgccggcggtaacgtggtatacgcgatagaaacgactgtctatgacaaggttggc
aacgtgatcaaacaagcgatgacaagttccagggataagtcttttatccgtgaaactcgc
tatgcgtacaccgacaataaccttgcattaaccgtatccgacaacggcggcgcctatacg
aaatacacttatgacaagaacggcaatgttgttaagaaggaaaccctgcgggacaaagat
ttgtatgatgtggaggagttctcgtacgacaatcaggaccggaagatagccgatattcgt
ttggtggatgagcaggatattgcagccgccacaagtatggccaatattgccgccttgcga
gatccggcatatccgggacgaatccgtctgattaccggttacgagtacgatcttctcggc
aacaaaatcaaacaaatcgatccgcgcgcttacgcattcgctgcgggggatgcggacaat
cgcaacaggtatgccattacgtacacgtacgacgctctaaaccgtgtggacaaaattgtc
cgcaagcaggacggccaagacgtatacacgcaatacacctacgacaaggttggcaataag
accgccatgcgcaacgaacggggctttgtcacgacttacgcttatgacagcatgaaccgt
cagatcatggttaccgattcactggaacaatcggtgaccacccagtatgataccgccggc
aaccggatcgcggtgacgaacgccaaaggcgatacgatgagcttcacgtacgacaaattg
aaccggctggtcaacacgaccgatgcatacggtacggtcattaacgtgaatgtgtatgat
gcgaatggcaatgtgatcaagaagattgatgccaaaggctacctgtccgcatccaacgat
acggcccgttacggaacgctttatacgtacgatctggcgaatcggctgatccaaaccgtc
gatccggagcttgccgcgaagaacaattcggctttgtttaaagctgtatatcgctataat
gctgcgggagaacaaacggaagaaatcgatgcgtttggcaataaaacaacattcgggtac
gatgcggcgggtcgtcttgttcaggtgaccgatcctctcgggattgcgaccagatacggg
tacgacagtatcggcaacaagctttatatgaccgatggccgcggcaaaacgacccaatat
gcctacggcgcattcggcttgctgacacaggtcaccaatgcagaccgtaaaacgattcaa
tacagctatgaccttggcttaaacctcgctgtcatgatcgatcgtaacggcaatcatacg
cgttacacctatgacaacagggatcaactgttgaccaagaccgtcgacgagacagacgat
cggatcagctatacgtacgatgagaaaggtaaccgcgcttcgatgaccgacgcaagcggg
acaagcagttactcttacgatagcaacgataaattgctgaaagtggtcaagaatggttcg
gctcaattgacttacacgtacgatgctgttggcaacgtctcgaccgtcacggatcagacc
ggtttcgtcacaacctacacctatgataaatcgaaccgaatgagcaccgtcatatttaac
ggaaaaaccgttgcctacgcctacgatccgaacggcaaccgtacttcgatctcctatgaa
ggcggcgtgaaggaaagctatacgtatgataagaataatcagctcttaaccttaaccaac
caagcgccgagcggcagcgtcatttcccaatacagctacacgtacgactacgtcggaaag
caactctcgaagaccgacggattgggaacgacgaattacctttacgatgcggcaggccgt
atcctggaagtagaagcgccgggcaaaacgacgatttacgcctacgacggcgcaggcaac
cgccagacgctgaacgaaacctatgcgtccgatcagttaagcggctacgttgatccgaat
acaaaacaagcaatgccataccggctcatgaagagtcagtatgtctattccaacgcgaat
gaattgttgaagctcgtcgagacgatgtacgatgagaacaacaaggaagtgctcaagaag
acaaccgactacctgtacgacaataacggcaatcaactgcgagcaaaagtcagctttgtg
ctgccgtatagcagcagtaagcgacaagtgaccgacggcagtctgttcggcgacggcgtt
acgggcgatattagcgccttgatcgaaagcgtcagcaacacctttgacggttttaatcgc
ttggtgaagacggagaaggttaaaggcggggaccgctcgacgatcactttcgcctatgac
ggtaacgatttgcgtacgcagaaagtatctcgcagctccaaggacggttatacggcccaa
gtgaccaactacgtctatgaccgccaacatgtcctcctggagacggatgctgcaggcgat
tctgcagttcgttacgtgcacggcatcaattacattgcccggattgacgctacgagcaag
ctgtcctactatttgttcaacggtcacggcgacgttgtacagacggtaagcgaagccgga
acggtcgaaaaccagtatgactacgacattttcggcaacccaaccttgacgatcgaggtg
tatgctgcttctattcgttacgcaggggagttcttcgacaccgaaacaggtctgtactat
cttcgcgcacgatactatgatccgtatgtcgggcggtttatatccgaggatacgtatgag
gggaaaatcaatgaccctctgtcgttgaacaggtatacgtatgcgcataacgatccgatc
atgtatgtagatccgacggggcatgcagttgtacaattacgcgaccttgcagccgctacg
ggttcaacggtaagttggaatcaaaaaacaggcacagccactgtgactctttcgtcaggt
gtctcggtacaattcaatactaaagatgacaaggaaaaaggatttagcctacagaatggt
cgaattgttatcgataatgaggaattcgataggcggatgaccaagagttattcggaatcc
aaaaaccccatgacaggaggaagagtagaggtcgtatccaaggtggataccgcagtaggg
gataacaagctgatcggttacgccagtgtgacgaaaacctattatgcccccgaatcacag
cagaagtcgagtatttctggagtcaagccaattattcttcctatggttgtacaggagaag
gaacgggtagctgtcgtagacttgacgacccacaagtcagatagcattgatctggctagt
ggtaaaggattgacgaagaagaatgaagtgctaatcaaaaatatcgtatccggatcagag
gggacagtcagtagggcgcaagctgcgttgatcacgttgttgatagggcaggacaatagt
cactttagcgagtacatgcaagagaagtacagcggcagttatctaggtgacaatatgcag
agtagcgatagatatttcgtatcgaaccatgcaagtaatgagatcatggaaaacggtaag
atatcgcttaaggctttcgagaggggcctgaagaagtactatcatcaggcatttcaagaa
gctaccgagcaggattaccagaactacgtcaagacgttaaatcaagctcatagcggtgat
atggtagacgttctaaacgcctatttctccaaagaagcattactgtatggaggttatttt
caggaattggcattatcagaaattggatgggccatgatgtttagatcatcaggttttagc
atttccaaaggagttgtgaggtttgctcctaagccgcaggttccgggtgcgggtaatttc
ttaagtaatccagccacaaaaaatggaacgctgaatattggtgctggtgggaaaccaata
gaaggtgcatacaacattgatcttgcacccaaagctcagggagtttataccggagatgct
accaatctgtctaatattaagactggtagtcagagtaaaatatatatagaaaatccttat
ggatatgatccgctaaattctgagatattaagagtcttatcacaagatggggaagttatt
ataaccggttcacgttctaacatggacaagttaatgaaaacattagattccaaaggatta
acaataaaaggcgagagagtagagatccctaatgacggaagttttaaaaccactacaggt
ggtaatatcaaatcaactatgctagatcaatataccattgtacgaaagtga
DBGET
integrated database retrieval system
