Cohnella sp. LGH: J4772_00780
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Entry
J4772_00780 CDS
T10185
Name
(GenBank) discoidin domain-containing protein
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
cohl Cohnella sp. LGH
Pathway
cohl00511
Other glycan degradation
cohl00520
Amino sugar and nucleotide sugar metabolism
cohl00600
Sphingolipid metabolism
cohl01100
Metabolic pathways
cohl04142
Lysosome
Brite
Enzymes [BR:
cohl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
J4772_00780
Chaperones and folding catalysts [BR:
cohl03110
]
Intramolecular chaperones
Others
J4772_00780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QTH43059
LinkDB
All DBs
Position
193353..197690
Genome browser
AA seq
1445 aa
AA seq
DB search
MRLRNRFIFLTLIVTAFIVAGIPSEKTSAAAGNLALGKTAYSSSNEVDFFGPEKAVDSGT
KDASRWSSLRTDDQWFYVDLGGPEEIGRVVINWQTPADKYQIFVSDDASSWRNVFADNRV
LVAPEGRDTIIDTIDFEPTVARYVKFQGVTRRPIDGIIYGYSFWEFEVYKGRPLLPPMME
AVKNSIVVSEGDTQLSLPAVPADFTLELVNTDSLPVIDAQGNIHASLVDTQVQLLLQIQS
VSDPTYLLTDNVLVTVPGLFQQTSDRNPEPRVIPSLREWLGATGEYRLTDSSRIVIRAED
EAALRRTADILQQDLLELTKLSLPVTVGAPQAGDLYLALDAAQAGLGKEGYALNIGEYAS
IASSAQTGVMFGTRTVLQLLDHAPDHKAMPQGQTRDYPKYPDRGFMLDVARKFYTIEFLQ
DYVKLMSYYKMNRFQIHLNDDIGDVGKFRLESENFPGITSADGFYTKQQFRDLQLLGMEY
GVNVVPEIDTPGHSGAFIAYDPRLGSSNQLDVTRPETIDFIKALFDEYLDGPNPTFVGSD
VHVGTDEYFGSNKEAFRSYTDMLLNHISGKGKRARLWGSLSAYDGTTPVSSNATMDIWYE
PYGSAKQAVELGYDIINTNTNLLYIVPQLYRNYLNYDFLYNEWEPNDWLETKLPYAHPQV
KGGMFALWNDVSVEKGVSMADSHQRILPSMQALAEKLWRGNRIDRNFASFQADAARYVDP
PNVHLSHKLQVENASHNVLNYTFDEGFADHSGNGYDGNAVNADLAKGIFGQALKLNGGAS
YVETPLRTLGFGWTMSMWLKPDADSPQGAVLLESPDGQLKYNIGGSGKIAITKENYVSEF
SYKLPTDRWTQVIVTGDDTGTSIFINGSEYTATLKDGSKLETFVLPVAKIGSATNAFKGL
IDELVVRNTYTDLHGNLALHMQAESSQPESSSYTADKAVDGKGDTRWSSDWVDDTWFMVD
LGEVKTIDAVSILWQTAYGSKYRLYVSEDKVNWTNVVKDNNGEINGKQGRVVTTFASTPA
RYVKFVGVSRATIFGYSFEEFEVYGEQYKLGNIGPIIGLLTAIEADRLVEANYSPEGWLQ
LQQAMGQAVAAIQSAQLSRPEVEQAYAGLSVARDRLTIEDVMGLIQLNVNGSIASNLYLP
QKGQQGTRIVWSSSKPDYLNANGQLLKRPSGGSSDVEVVLTATISKGSASADKTFKVMIK
ALPSSGGGGWYPSPVNPGSGGEQNGGSNSGGGDQGNSNGSENGNGNGNGGGNGTESGGSI
AVRLNDISSHWAETSIKRAVELGFVAGYTDGSFKPNQKVSRDEFVAMLVKALKLQGAEGS
LDFADSGSIQNWAKPYIAQALESGLISGYADRTFRPKASISRAELATMIVRGLGLKPAEG
PELSYADADQIPAWAKPYVAAAQEAGVMNGRGDNRFAPAVSATRAEAAVVILNMLDALAK
MKAQE
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtttacggaatcggtttatttttttaacattaattgttaccgctttcattgttgct
ggcattccttcagagaagaccagtgcggcagcagggaatttggctctagggaagaccgct
tattcgtcatcgaacgaagtggattttttcgggcctgagaaagcggtggatagcggcacc
aaagatgcaagccgatggtcatcgctcagaacggacgaccaatggttttacgtcgatctg
ggcgggcctgaagaaatcggaagagtggtcatcaactggcagactcctgcggacaagtat
caaattttcgtgtctgacgatgcgtcatcctggcgcaacgtatttgcggacaatcgcgtg
ctcgtcgctcccgagggtagagatacgatcatcgatacgatcgatttcgagcctaccgtt
gcgcgatacgtaaagttccaaggagtgacgcggcgtcccatcgatggaattatttatgga
tactccttctgggagtttgaggtatacaagggcagaccgctgctgccgcctatgatggag
gctgtcaaaaacagcatcgtcgtctccgaaggagatacccaactgagcctgcccgctgtg
ccggccgattttacgctggagctggtgaatacagacagtctgccggtgatcgatgcgcag
ggcaatattcatgcatcgcttgtcgatacgcaggttcaactgctgctgcaaatccagagc
gtcagcgatccaacgtatctgttaacggataatgtgctagtcaccgtgcccggtctcttc
cagcagacgagcgatcgaaatcccgagccgcgcgtcataccgtctctgcgcgaatggctg
ggcgcaaccggcgagtatcgcttgacggacagttcaagaatcgtcatccgcgcggaggat
gaagcggctctgcggcggacagccgacattttgcagcaggacctgttggagttaacgaag
ctatcgcttccggtgactgtcggcgcgcctcaggcgggagacctctatttggcgctggat
gccgcgcaagcgggcttagggaaggaagggtatgcgctgaatatcggcgaatatgcttct
attgcctcctccgctcaaacgggggtcatgttcggcacaaggacagtattgcagctgctt
gatcatgcacccgatcataaggcgatgcctcaagggcagacgcgcgattatccgaagtac
cctgatcggggctttatgctggatgtggcccgtaagttttacacgatcgagtttttgcag
gactatgtgaagctgatgtcctattacaagatgaaccggttccaaattcacttgaacgac
gatatcggcgatgtcgggaaatttcgtctggagagcgagaatttcccgggaattacgagc
gcggacggattctatacgaaacagcagttcagggatctgcagctgctcgggatggagtac
ggcgtaaacgtcgtaccggaaatcgatacgccgggccactccggggcgttcatcgcctac
gatccgcggttgggcagcagcaaccaattagatgttacgcggcctgagacgatcgacttt
attaaggcgctctttgacgagtatttggacggtcccaatccgaccttcgtcggctcggac
gtacacgtcggtacggatgaatatttcggcagcaataaggaggctttccgcagttacacg
gacatgctccttaatcatattagcggtaaaggcaagcgagcccgtctgtggggcagcctg
tccgcctacgacggtacgacgccggtcagcagcaatgccacgatggacatctggtacgag
ccatacggcagcgccaagcaggcagttgagctcggctacgacattatcaacactaacacg
aacttgctctacatcgttccgcagctgtaccgcaactatctgaattacgattttctctac
aacgaatgggagcctaacgattggctggaaaccaagcttccttatgcgcatccacaggta
aaaggcggcatgttcgcgctctggaacgatgtatccgtggaaaaaggagtttccatggcg
gactcgcatcaacgaattctgccttctatgcaagctttggcggagaagctgtggagagga
aaccgcattgaccggaacttcgcgagcttccaggcggacgccgcgcgttacgtggacccg
cccaatgtacatctatctcataagctgcaggtcgaaaacgcgagccataacgtgttaaac
tacacgttcgacgaagggtttgcggatcattccggcaacggctatgacggtaacgcggta
aatgccgacttggccaaagggattttcgggcaggcgttaaagctgaacggcggcgccagc
tacgtggaaaccccgcttcgcacgctaggattcggatggacgatgtccatgtggctcaag
ccggacgccgacagcccgcagggggctgtgctgctggaatcgccggacggacagttgaag
tacaacattggcggcagcggcaaaatcgctatcacgaaggaaaattatgtaagcgaattc
agttacaagctgccgaccgatcgctggacgcaagtcattgtgaccggcgacgatacgggg
acctcgatctttattaacggcagcgagtatacggcaacgttaaaagacggctccaagctg
gaaacgttcgttctgcctgtcgcgaagatcggcagcgcaacgaatgccttcaaaggcctg
attgacgagcttgtcgtgcggaacacctatacggacctgcatggaaatctggcgctgcac
atgcaggctgaatcctcgcagccggaatcctcgtcctacacggcggacaaggcggtggac
ggcaagggagataccagatggtccagcgattgggtggacgatacgtggtttatggtggat
ctcggcgaagtgaagaccatagatgccgtgtccattctgtggcagacggcttacggctcg
aaataccgcctctacgtatccgaggacaaggtgaactggacgaatgtcgtgaaggacaac
aatggcgagattaacggcaagcagggccgggtcgtcacaactttcgccagtacgccggcc
agatacgtgaagttcgtaggcgtgtcgagagcgaccatattcggctattcctttgaggaa
ttcgaagtgtacggcgagcaatacaagctcggcaacatcggaccgattatcggcctgctg
acggcaattgaagccgatcggcttgtggaagccaattattctcctgagggctggttgcag
cttcagcaagcgatgggccaagcggtggcggctattcagagcgcgcagctgtctcgtcct
gaagtcgaacaggcgtatgccgggttgagcgttgcgcgcgatcgtctgacgatcgaagac
gtgatgggcttgatccagcttaacgtgaacggaagcatagcctccaacctctatcttccg
caaaaaggacagcagggtacgcgcattgtctggagcagctcgaagcccgactacttaaat
gccaacggccaactgctgaagcgtccgtccggcggttcaagcgacgtggaggtcgtgctg
accgcgacgatcagcaagggaagcgcttctgcggacaaaacgtttaaggtcatgatcaaa
gcgctgccgagctccggcggcgggggatggtatccgagtccggtcaatccgggttccgga
ggcgaacaaaacggtggttcgaattcgggcggcggagatcagggcaatagcaatggtagt
gaaaacggcaacggcaacggaaatggcggcggcaatggtacggagtctggcgggtcaatc
gcggtgcggctaaacgatatttccagccattgggccgaaacgtcgatcaagcgggccgtc
gagcttggattcgtggccggctataccgacggatcgttcaaaccgaatcagaaggtgagc
agggacgaattcgtcgccatgctggtcaaagcgctgaagctgcaaggagcggaaggttcg
ctggacttcgcggactccggctcgattcagaactgggcaaaaccgtatatcgcgcaagcc
ttggaatccggcctgattagcggctacgcggaccggactttccgtccgaaagcctcgatc
agccgcgcggagctggctacgatgatcgttcgcggcttgggcttgaagcctgcggaaggt
ccggagctctcttacgcagacgcggatcaaattccggcttgggcgaagccgtacgtggca
gcggcccaggaggcgggagtaatgaacggacgcggagacaaccggtttgcgccggccgtt
tcggcaacgcgagcggaggctgccgttgtcattctgaacatgcttgatgcgcttgcaaag
atgaaggcacaggaatag
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