Cohnella sp. LGH: J4772_00870
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Entry
J4772_00870 CDS
T10185
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
cohl Cohnella sp. LGH
Pathway
cohl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cohl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
J4772_00870 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cohl01007
]
J4772_00870 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cohl03016
]
J4772_00870 (lysS)
Enzymes [BR:
cohl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
J4772_00870 (lysS)
Amino acid related enzymes [BR:
cohl01007
]
Aminoacyl-tRNA synthetase
Class II (A)
J4772_00870 (lysS)
Transfer RNA biogenesis [BR:
cohl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
J4772_00870 (lysS)
Prokaryotic type
Other AARSs
J4772_00870 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
QTH43075
LinkDB
All DBs
Position
220304..221824
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AA seq
506 aa
AA seq
DB search
MEHTEQEHQTDAAELGELLQIRRAKLDELRALGVDPFGVKFARTHHAGDLASKYSELSKE
ELEAQEIAVSVAGRIMTKRGMGKAAFANLQDLSGKIQIYVRQDALSEQKYKAFDLLDIGD
MIGVKGTLFKTKTGELSIKVLELEVLTKSLLPLPDKFHGLKDVETRYRQRYVDLIVNPDV
QKTFITRSRIIQSMRRYLDDRGYLEVETPTLHSIAGGAAARPFITHHNALDMQLYMRIAI
ELHLKRLIVGGLEKVYEIGRVYRNEGISTRHNPEFTMIELYEAYADYEDIMRLTESLIAH
IAQEVLGTTKITYQGQEVDLTPSWRRVSMTELIRETVDVDFTAQMTDEEAHALAKEHKVP
VEKHMTFGHIVNAFFETFCEHTLIQPTFVTGHPVAISPLAKKNEADPRFTDRFELFIVAR
EHANAFTELNDPIDQRERFESQLEEKEAGNDEAHEMDDDFIRALEHGMPPTGGLGIGVDR
LVMLLTDAPSIRDVLLFPHMRERSDG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggagcacacagagcaggagcatcagacggacgcggcggaattaggcgaactgctacag
atccgcagagcaaaattggacgagctgagagcgcttggcgtcgatccgttcggcgttaag
ttcgcacgcactcatcatgccggcgaccttgcttcgaagtattcggagctgtcgaaggaa
gagctggaagcgcaggagattgcggtcagcgtagcaggccggattatgacgaagcggggg
atgggcaaggctgcgtttgccaatctgcaagatttgagcggcaaaattcagatctacgtt
cgccaggacgctctgtccgagcagaagtataaggcgtttgacctgcttgacatcggcgat
atgatcggcgtgaagggtactctgttcaaaacgaaaacgggcgagctgtcgatcaaggtg
ctggagcttgaagtgctgaccaagtcgctgcttccgctgccggacaagttccatggcttg
aaggacgtggagactcgctatcgccagcgctatgtggatttgatcgttaacccggacgtg
cagaagacgttcattacgcgctcgcgtattattcagtcgatgcgccgctatttggacgac
cgcgggtatttggaagtcgaaacgcctacgctgcattcgattgcgggcggagctgctgct
cgtcctttcattacgcaccacaatgcgctcgatatgcagctttatatgcgtatcgcgatt
gagcttcatctgaagcggctgatcgtcggcggattggagaaggtgtacgagatcggacgc
gtttatcggaatgaaggcatctcgacgcgccataatcccgagttcacgatgatcgagctg
tacgaagcttatgccgattatgaagacatcatgcgtctgaccgagtcgttgattgctcat
atcgctcaagaggtacttggtacgacgaagatcacctatcaagggcaggaagtggacctg
actccgtcgtggcgcagagtttcgatgactgagttgattcgcgagacggtagacgtggac
tttacggctcagatgacggatgaggaagctcatgcgctggccaaggagcataaggttccg
gtcgaaaagcatatgacgttcggccacatcgtcaacgccttcttcgagacgttctgcgag
catacgctgatacagcctactttcgttacagggcatccggtggcgatctctcctctggcg
aagaagaacgaggccgatcctcggtttacggaccgttttgagctgttcatcgtcgcccga
gagcacgccaacgccttcaccgagctgaacgatccgatcgatcaacgggagcgttttgaa
tcgcagcttgaagagaaggaagcgggcaacgacgaagcgcacgagatggacgacgatttc
atccgcgctctggagcacggcatgcccccgacgggcggactcggcatcggtgtcgaccgt
ctggttatgctgctgacagatgcgccgtcgatccgcgacgttctgctgttccctcatatg
cgggagcgttccgacggataa
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