Cohnella sp. LGH: J4772_01450
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Entry
J4772_01450 CDS
T10185
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cohl Cohnella sp. LGH
Pathway
cohl03420
Nucleotide excision repair
cohl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cohl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J4772_01450
03430 Mismatch repair
J4772_01450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cohl03400
]
J4772_01450
Enzymes [BR:
cohl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J4772_01450
DNA repair and recombination proteins [BR:
cohl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J4772_01450
MMR (mismatch excision repair)
Other MMR factors
J4772_01450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
PhoH
DEAD
SLFN-g3_helicase
AAA_30
nSTAND3
AAA_16
NACHT
Motif
Other DBs
NCBI-ProteinID:
QTH43166
LinkDB
All DBs
Position
361031..363475
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AA seq
814 aa
AA seq
DB search
MINANDWKQEQEWLERVTEQLKLRIADMEPEVTGLRNQVTDIRRRFWEEVTVNTSTHEDF
EETFYSIRQQEALLSERERSHRLRLRQWNNMKRLLPSPFFGRIDFEEDGTGFNESIYIGV
SSFADEDGMSFLVYDWRTPIASLYYDYSPGRVAYATPGGLLTGEMRLKRQYQIRDGQLRN
VFDTSITIGDELLQQALGQGADTQMKSIVATIQKEQNAIIRDDKSRMLIVQGAAGSGKTS
AAMQRAAYLLYRHRNRLAADQIVLFSPNPMFNSYVSTVLPELGEENIQQTTFQEYLAYWL
EPDMRPESPFDQLEDVLTAAPTTENEARMQGIRYKASEAYLLALQGYAAWLCREGMRFCD
IRFRDRVLITAQRMETQFFSYDSSVRLDNRVALLKDWLLKELKALESEECAATWVQDELD
YLDNDQYDEAYRTLLKKVQREEVVFDFTREYVEEYGELRGREQGEENVFDFAGQEEELLR
RMIVKESFRPLRQEVKRFKFVDLIGLYGQLFGEKADYRRMTGGTEVPEHWTEIGRQTRAK
LERLELLYEDATPFLYMRELVEGVRRNTDVRHVFVDEGQDYSPFQYAFLKRLFPRARMTV
LGDFGQAIFVQATSLHEEDSPLVRLYGHEETNLIRLVRSYRSTQEIVAFTKGMLPGGEEI
VPFERYGGKPRLLKLGDGKERDERIFADLAVLQAEGFDSIAVITKTAAEAREAYDALTEQ
GGEALRLVTKETLTFEKGIAVIPAYLAKGVEFDAVLIYDASAQVYGRESERKLFYTACTR
AMHQLRLYSLGEVTPYLRDLDSELYEMENRTGSL
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgatcaatgcgaacgattggaagcaagagcaggaatggcttgagcgggtcacggagcaa
ctgaagctgagaatcgccgatatggaacctgaggtgaccgggttacgcaatcaggtgacg
gacatccgcagacggttctgggaagaagtgacggtcaacacaagcacgcatgaggacttc
gaagaaaccttctatagcatcaggcagcaagaggcgctgttgtccgagcgcgagcgtagc
catcgcctgcgtttgcggcagtggaacaatatgaagcgactattgccttctcccttcttc
ggtcgtattgattttgaagaggatggcacgggtttcaacgaatcaatctatatcggtgtg
tcgtccttcgccgatgaggacgggatgagcttcctggtctacgattggagaacgccgatt
gccagcttatactacgactattctccaggaagggtcgcgtatgccacgcctggcggtctc
ctcacaggagaaatgcggttaaagcgtcaataccagattcgcgacggacagcttcgcaat
gttttcgataccagcataacgattggagacgagctgcttcagcaggcgctcggccaaggc
gcagatacgcaaatgaagagcattgtggcgacgatccagaaggagcagaacgcgataata
agggacgataaaagccggatgctcatcgtacaaggcgcagccggcagtggcaaaacatcc
gctgcgatgcagcgtgcagcctacttgctgtatcgacaccgcaaccgacttgcggcggat
cagatcgtgttgttttcgcctaatccgatgttcaacagttatgtgtctacggttctcccc
gagcttggcgaggagaatattcagcagacgacgttccaagaataccttgcttactggctt
gagcccgacatgcgcccggaaagtccgtttgaccaacttgaagacgtgctcacagcggcg
ccgacaacggaaaacgaagcgcgtatgcaagggatccgctacaaggcgtcggaggcgtat
ctgctggcgctccaaggctacgcggcatggctatgccgggagggcatgaggttttgcgat
attcgcttcagagatcgggtgctgattacggcgcagcggatggaaacgcagtttttcagc
tacgacagttcggttcgactggacaatcgcgttgcgctgctgaaggattggctgctgaag
gagcttaaagctctggagagcgaggagtgcgcggcgacctgggttcaagacgagcttgat
tatctcgacaacgatcaatacgacgaagcctacagaactctgctcaaaaaggttcagcgg
gaagaagtggtattcgattttacacgagagtacgttgaggagtatggagagcttcgcggc
cgggaacaaggcgaggaaaatgtattcgatttcgccggacaggaggaggaactgcttcgc
cgcatgatcgtgaaagagagcttccgtccgctgcggcaggaggtgaagcgattcaagttc
gtggacttgattgggctgtacggccaactgtttggcgagaaggcggattatcgccggatg
accggcggaacggaggtacccgagcattggacggaaatcggcaggcagacgcgggcaaag
ctggagcggcttgagctgctgtacgaggatgcgactcctttcctgtacatgagggagctt
gtggaaggcgtgaggagaaataccgatgtgcggcatgtttttgtagatgaaggacaggat
tattcgccgttccaatatgcttttctgaaacgattgtttccgcgcgctcgcatgacggta
ctgggcgatttcggccaggcgatctttgtgcaggcgaccagtttgcatgaggaagactcg
ccgcttgttcgtctgtacggccatgaagaaacgaatctgattcggcttgttcggagctat
cgctccactcaggaaattgtggcgtttacgaaggggatgctgcccggcggggaggagatc
gtcccgttcgagaggtacggaggcaagccgcgcctgttgaagttgggcgacgggaaggag
cgggatgagcgaatctttgcggatcttgccgtgctgcaggccgagggtttcgattcgatt
gcggtgattacgaaaacggcggccgaggcccgtgaagcgtacgatgctttgacggaacaa
ggaggagaagcgctgcggctcgtcacgaaagagacgctgacgttcgagaaagggattgcg
gttattcccgcatatctggcaaaaggcgtcgagttcgatgctgtgctcatctacgatgct
tccgcccaggtttacggccgagagagcgagcgcaagctgttctataccgcctgcacccgc
gccatgcaccaacttagattgtattcgcttggagaggtgacgccgtatttgcgagatctt
gattcggagttgtatgagatggaaaaccggacgggttctttgtga
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