Cohnella sp. LGH: J4772_02520
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Entry
J4772_02520 CDS
T10185
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
cohl Cohnella sp. LGH
Pathway
cohl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cohl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J4772_02520 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cohl03400
]
J4772_02520 (xth)
Enzymes [BR:
cohl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
J4772_02520 (xth)
DNA repair and recombination proteins [BR:
cohl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
J4772_02520 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
QTH43360
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All DBs
Position
complement(635376..636128)
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AA seq
250 aa
AA seq
DB search
MKLVSWNVNGLRACVNKGFLDYFREVDADIVCLQETKLSEGQLTLAIGEEYEQYWNYAEK
KGYSGTAVLTRIKPLSVRYGIEEDSEPEGRIITLEFEDFFLVTVYTPNAKRDLSRLDYRM
EWEDRFLAHLSELDKRKPVIACGDLNVAHQEIDIKNAKSNRGNSGFTDEEREKMTRLLGA
GFIDTFRHLHPDRSDVYSWWSNMPGVRDRNVGWRIDYFIASARLSPAIKDAAIHCDILGS
DHCPVALDIF
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaaattggtatcttggaacgttaacggattgcgggcttgcgtgaacaaaggcttcctc
gattacttccgggaagtcgacgccgatatcgtctgtctgcaggaaaccaagctctcggaa
ggccaactgactctcgccatcggggaagagtacgagcagtattggaattacgcggagaag
aagggctactccggcaccgccgtcctgacaaggattaagccgctatccgtacgttacggc
atcgaagaagattccgagccggaaggtcggatcattacgctcgagttcgaggatttcttc
ctcgtgaccgtctatacgccgaacgccaagcgggacttgtcccggctggattacaggatg
gaatgggaggatcggttcctcgctcacttgtccgagctggacaagcggaagccggtgatc
gcctgcggagatttgaacgtcgcccatcaggagatcgacatcaagaacgccaagtcgaac
cggggcaactccggcttcaccgacgaagagcgcgagaagatgactcggttgctcggcgcc
ggattcatcgacacgttccggcacctgcacccggaccggtcggacgtctattcctggtgg
tcgaacatgccgggcgtcagagatcgcaacgtcggctggagaatcgactactttatcgcc
tccgcccgactgtctcccgcgatcaaagatgccgctatacactgcgatattttgggcagc
gaccactgcccggtcgcattggatattttctag
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