Cohnella sp. LGH: J4772_02855
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Entry
J4772_02855 CDS
T10185
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cohl Cohnella sp. LGH
Pathway
cohl03420
Nucleotide excision repair
cohl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cohl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J4772_02855
03430 Mismatch repair
J4772_02855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cohl03400
]
J4772_02855
Enzymes [BR:
cohl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J4772_02855
DNA repair and recombination proteins [BR:
cohl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J4772_02855
MMR (mismatch excision repair)
Other MMR factors
J4772_02855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
UvrD_C_2
Viral_helicase1
AAA_22
SLFN-g3_helicase
PhoH
ResIII
NACHT
nSTAND3
DEAD
Catalase_C
AAA_30
AAA_16
DUF2529
Mg_chelatase
Pecanex_C
Motif
Other DBs
NCBI-ProteinID:
QTH43423
LinkDB
All DBs
Position
complement(719483..721576)
Genome browser
AA seq
697 aa
AA seq
DB search
MDTQSPVYREEQQRLQDTFREIDRQRAGIGPVYRGQDFTEQLLEEKREEYRRRLDLLGKE
PYFGRLDFKENGKPMPLPLYIGKRGMDLQETGEPYVIDWRAPVASLFYSFTGGEAPVTYD
APDGTIHGEIYRKRNLSIRDQKLGRIVDSYERGGDNIGLNDEFLLYKLGDKKDNKLRDIV
STIQAEQDSIIRAPRHKALIIQGAAGSGKTTVALHRLAFLLYQYQQQIRAERMVIFAPNT
MFLDYISGVLPELGVGNVKQTTFAEWALERLSGSIKLVKDATEGELWFSLEGKRPTINDE
TPGRYKGSLAFKALLDEKLKGLETHFLDPQPFEPWTGRILPAATIREWFEVEYRHYALAP
RLERLKARINRWLEMQLGEIGDPKIRKEKSKTGKQRFRTYTNKLPKADALSFYQRLFSSD
DSADIPKSIVQSTKTYLKKSEVRHEDLPALVWIHYVLNGAENLVFDHVVVDEAQDVSPLQ
IALLNQFMNEPSFTILGDLAQGIHAYRGVQSWEELSDVFAEEYRSYHALQQSYRSTLEII
EFANRILPHTGTGLPPAVPVFRSGDPVELAHLIDEADRLPRIERFIQDNRERGMQTIAIV
CRTDDDCARLADELRGAGVEANLISENQTQYRGGITVVPVYLAKGLEFDAVLVADADDRR
YAAAPQDAKLLYVACTRALHRLTLMYQGRQSPLFAES
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggatacgcaaagcccggtttatcgggaggaacaacaacggctgcaggataccttccgg
gaaatcgaccgacagagagccggaataggcccggtctaccggggacaggatttcaccgag
cagctgctggaagagaagcgtgaggaatatcggcgcaggctcgatctgctcggcaaggag
ccttacttcggcaggctggatttcaaggagaacggcaaacccatgccgctgccactgtat
atcggcaagagagggatggatcttcaagagacgggagagccgtacgtcatcgattggaga
gcgcccgtcgccagccttttctactcctttaccggaggcgaagcgccggtcacctatgac
gcgccggacggcacaatccacggagaaatctatcgcaagcgcaacttgtcgatccgcgat
cagaagctgggccgcatcgtcgacagctacgagcggggaggcgacaacatcggtttgaac
gacgagttcctcctctacaagctcggggacaagaaggataacaagctgcgggacatcgtg
tccacgattcaggccgagcaggacagcatcattcgcgccccgcgccataaagcgctgatc
atccagggggccgccggttcgggaaaaacgacggtcgcgctgcatcggctcgcttttctg
ctctaccagtatcagcagcagatccgtgcggaaagaatggtgattttcgctccgaatacg
atgttcctcgactacatttccggcgtgctccctgagcttggcgtcggcaacgtcaagcag
acgacgttcgcggaatgggcgctggagcggctgagcggcagcatcaagctggtcaaagac
gccacggagggagagctgtggttctcactcgaaggcaaacggccgacgatcaacgatgag
acgccgggaagatataaaggctcgctcgcctttaaagcgctattagacgaaaagctgaag
ggactggaaacgcattttctcgatcctcagccctttgagccatggacgggccgcattctg
cccgccgctacaattcgcgaatggttcgaggtagaataccgtcactacgcgctcgccccg
cgtctggaaagactgaaagccagaatcaatcgctggttggagatgcagcttggagagatc
ggagacccgaaaattcgcaaggaaaaatccaaaaccggcaaacaacggtttcggacctac
acgaacaaattgcccaaagcggacgccttgagcttctaccagcgcttgttctcctcggac
gactcggcggacattccgaaaagcattgtccaaagcacgaaaacctatctaaaaaagagc
gaggttcggcatgaagaccttcccgctcttgtgtggattcactatgttttgaacggggcg
gaaaaccttgtgttcgaccacgttgtcgtggacgaagcgcaggacgtatccccgcttcaa
atcgccctgttgaaccaattcatgaacgagccttcgttcaccattctcggagatttggct
cagggcattcatgcttatcgcggcgtacagagctgggaggagctgtcggacgtattcgcg
gaggaataccgatcctatcacgccctgcagcaaagctatcgttcaacgcttgaaatcatc
gagttcgctaaccgcattctgccgcataccggcacgggactgcctcccgccgtccctgta
ttccgcagcggcgacccggtcgagctcgctcacctgattgacgaagcagatcgccttccc
cgtatcgaacgcttcatccaggataatcgggagcgcggcatgcagacgatcgcgatcgtc
tgccgtacagacgacgattgcgcacggctggccgatgagctccgcggcgccggcgtcgaa
gcgaacctgatctccgagaatcagacccagtatcgcggcggcataaccgtcgttcctgta
tatctggccaagggcctcgagttcgacgccgtgcttgtagccgacgcggacgaccgccgc
tacgcggccgcgccgcaggacgccaagctgctgtacgtcgcctgcacgcgcgcgcttcac
cgtctgactctgatgtatcaagggcggcagagccctctgttcgccgaatcctaa
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