Cohnella sp. LGH: J4772_02940
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Entry
J4772_02940 CDS
T10185
Name
(GenBank) extracellular solute-binding protein
KO
K10117
raffinose/stachyose/melibiose transport system substrate-binding protein
Organism
cohl Cohnella sp. LGH
Pathway
cohl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cohl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
J4772_02940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cohl02000
]
J4772_02940
Transporters [BR:
cohl02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Raffinose/stachyose/melibiose transporter
J4772_02940
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_1
DUF2789
Motif
Other DBs
NCBI-ProteinID:
QTH43437
LinkDB
All DBs
Position
complement(738160..739671)
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AA seq
503 aa
AA seq
DB search
MSFTMNAKKLPAILLGTGLLLGGCSGNNSDGAPSESAAGTSSANPSASTNSGWQGTITMY
AQVYTPNSKNIAGLKNQTKLREVADEYEAAHPGIIIEFVDEEFKDYTQTVRVKAAAGEMF
DVFWGQWAELNNTFPKGIAEDLTEYFNKPNPYIPDKATWAEAMNTTVISETRSPDSKSYN
INGDYVATAFFYNKDLFEQAGIAQAPTSWSELISATQQLKAAGITAMSQAPDYDWFQRHF
LSDFFSKEYETISAFDESPGVSSLDQSIAIVKGMLNTSDERFMGWWPLFKSLTDNWKPDY
LSSDPGVVGSNARNDFLAGKTAIFYDGSWLPENAKDAKVTFGLGSFNFPVLTTADTPYTT
GEDVSGAVGGPNAAFQFAVSTKEANATMKETGKQAAVIDWLQFLGTPANVEKIVNEHGTF
VPTWPDTKPAESMIELANQASNKLKALGVGGSSPNLGKNIQRIFGLYLSGNIDFDKAKAD
VQKELDTAIKEYQSKNNVDFSQY
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcaccatgaacgccaaaaaacttcccgcaatactgctcggaaccggacttctt
ctcggcggctgcagcggcaacaactccgacggagctccttcggaatcggcggcaggcacc
tcttccgccaatccaagcgcaagtacaaactccggatggcaggggaccattacgatgtac
gctcaagtgtacacgcccaactccaaaaacatcgccggcttgaaaaatcagacgaagctt
cgcgaggtggccgacgagtacgaagccgcacatcccggcattataatcgaattcgtcgac
gaagagttcaaggattatacgcagacagttcgggtcaaggcggcggccggagaaatgttc
gacgtgttctggggacaatgggccgaactaaacaatacgtttccgaaaggcatcgcagag
gatttgacggagtacttcaacaagccgaacccttatattccagacaaagcgacctgggcg
gaagcgatgaatacgaccgtcatcagcgagacgcgctcccctgacagcaagagctataac
attaacggggactacgtcgcgaccgcctttttctacaataaagatttgttcgagcaggcc
ggcatcgcgcaagcgccgactagctggtcggagctgatctccgccacgcagcaattgaag
gcggcaggcattacggccatgtctcaggctccagattacgactggttccagcgccacttc
ctgtcggacttcttctctaaagagtacgagacgatctccgccttcgacgagagcccgggc
gtatcgtcgctggatcagagcatagccattgtgaaagggatgctgaatacttccgacgag
cgctttatgggttggtggccgctgttcaagtcgttaaccgacaattggaagcccgattac
ctgtcgtccgatcccggggttgtcggcagcaacgcgaggaacgatttcctcgccgggaaa
accgccattttctacgacggcagctggttgcccgagaacgccaaggacgccaaagtcaca
ttcgggctaggctcgtttaacttccccgtgcttacgacggcggacactccgtacacgacc
ggagaagacgtgtcgggagcggtcggcggtccgaacgccgccttccagttcgccgtctcc
accaaagaggcgaatgcaaccatgaaggagacaggcaagcaagcggccgttatcgattgg
ctgcaattcctgggaacgccggccaacgtagagaaaatcgtcaacgagcacggcaccttc
gtcccgacctggccggatacgaaacccgccgaaagcatgatcgaactcgccaaccaggct
tcgaacaagctgaaggcgctcggcgtaggcggatcttccccgaacctgggcaaaaatata
cagcgcatcttcggcctgtacttgagcggcaatatcgatttcgacaaagcgaaggccgat
gtacagaaagagctcgatacggcgatcaaggaataccagtccaaaaacaatgtcgacttc
agtcaatactag
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