Cohnella sp. LGH: J4772_04960
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Entry
J4772_04960 CDS
T10185
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
cohl Cohnella sp. LGH
Brite
KEGG Orthology (KO) [BR:
cohl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
J4772_04960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cohl03400
]
J4772_04960
DNA repair and recombination proteins [BR:
cohl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
J4772_04960
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
CDC24_OB3
CpXC
Motif
Other DBs
NCBI-ProteinID:
QTH43776
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All DBs
Position
1260569..1261438
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AA seq
289 aa
AA seq
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MHTVWKGAISFGLVHVPVKMFTATEDKDIHLRMIHKVCGTPIANVRTCPHCEKEAAWEEI
ARGYEQEKGRFVLFEPEELEAIKPDNTKTIQILDFVDLTEIDPLYYQKAYYLSPDQAGAG
AYNLLLEAMRQSGKIGIAKIAIRSKSSLAAIRPVDNCICMETMHYPDEIRQLQLVPNLPE
QTNVNDKELTMAKMLIEQLSTPFEPTKYTDDYRIALQEAIQRKISGEGADIVTAPDVERT
NVIDLMAALQASLEAAKPKDASGSEDAGGDRGKAKTRSTRGRKKEGAVP
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcatacggtctggaaaggcgcgatcagcttcggcctcgttcatgttcccgtgaaaatg
ttcaccgccaccgaggacaaagatatccatctgcgaatgattcacaaagtctgcggaacg
cccatcgccaacgttcgaacttgcccccactgcgagaaggaggctgcctgggaagaaatc
gcccgcggctacgaacaggagaagggccggttcgtactgttcgagccggaggaactggaa
gcgatcaaacccgacaatacgaagacgattcaaattctcgatttcgtcgatctgacggaa
attgatccgctgtattaccagaaggcttactatctgtctcccgatcaagccggggcgggc
gcctacaatctgctgctggaagcgatgcgtcagtccggtaaaatcggcatcgccaaaatc
gcgatccgcagcaaaagcagcctggccgccatacgccccgtcgacaattgcatctgtatg
gaaacgatgcactatccggacgagattcgccagctgcagcttgtgccgaatttgccggaa
cagacgaacgtcaacgataaggaattgacgatggccaaaatgctgatcgagcagctctcg
acgccgttcgagccgacgaaatacaccgacgattaccgcattgccctccaagaagcgatt
cagcgcaaaatatccggagaaggcgcggacatcgtcaccgctccggacgtggaaagaacg
aacgttatcgacctgatggccgcactgcaagcgagccttgaagcagccaagccgaaagat
gcgtccggctccgaagacgccggcggcgaccgcggcaaagcgaaaacccgcagcacgcgc
gggcgcaagaaagaaggggcggttccttaa
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