Cohnella sp. LGH: J4772_08235
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Entry
J4772_08235 CDS
T10185
Name
(GenBank) extracellular solute-binding protein
KO
K25673
polygalacturonan/rhamnogalacturonan transport system substrate-binding protein
Organism
cohl Cohnella sp. LGH
Brite
KEGG Orthology (KO) [BR:
cohl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cohl02000
]
J4772_08235
Transporters [BR:
cohl02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Polygalacturonan/rhamnogalacturonan transporter
J4772_08235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
QTH44368
LinkDB
All DBs
Position
complement(2046031..2047623)
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AA seq
530 aa
AA seq
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MFRKKLVLMLLVVFTVASILSGCGGSKDNGAEGSGSSSTSGGEESKAAQSAEPVELSVFS
WMFEGADSPDSVIYKKLQEKLNVRLKPVTASWNDWEEKLNVMIASGEMPDVFISYGIDRP
VQYRQWIKEGMVLPISDYADSYPNIRDSLANFEMLAKTTGGKHYALPIYNESGSGKDAVS
GHNILIRKDWLDKLGLPVPTTIDEFYSVAKAFTENDPDGNGKKDTYGYTSSSGGVWWQYP
IFNAFDTSTERWEKKDGQWMPEVISEETKEAVTFLHQMYNEKMLDPEFMLNTDDKKIEKF
VTGKVGMIIHNANATFYNDIYNKFNQAKPEADPKSIFTWVGTLKGKTGIQRMDGFNNFWC
ETSINAGISEEKRQKALELLDYLLSDEGQDLMLNGVEGVHYKKDGDTVVSLMTDEEKTKD
KGFSLKALVSWNTDYLPDTTPNKEEIVALSKSTGDYAVSNPLAYLNIDEDALDPSIPNQL
TDFVNEEIVKLIANSKDVAADFDKFKEAWLSKGGAKVIEETNKQATTEGR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgtttagaaaaaaactggtgctgatgttattggtcgtattcacggtggccagcattctg
tcgggctgcggcggaagcaaagataatggggcggaaggaagcggttcttcctcgacaagc
ggaggagaggagagcaaagctgcgcaatcggcggagcctgtcgagctatccgtattcagc
tggatgttcgaaggagccgattctccggattccgtcatctacaagaagctgcaggagaaa
ttgaacgttaggctgaagccggttacggcttcctggaacgactgggaagagaagctcaac
gtgatgatcgcctcgggcgaaatgcccgacgtatttatctcttacggcatcgaccgcccg
gttcaatatcgccagtggatcaaagagggaatggtgttgccgatctccgactatgccgat
tcgtatccgaatatccgcgattctctcgccaacttcgagatgctggccaagacgacggga
ggcaagcactacgcgctgccgatctacaatgagtcgggaagcggcaaggacgcggtcagc
ggacataacattctgatccgcaaggattggctggacaagctcggattgcccgttccgact
acgatcgacgaattttattcggtagccaaagctttcacggagaacgacccggacggcaac
ggcaagaaggacacgtacggatacacatccagctcgggcggcgtatggtggcagtacccg
atctttaacgcattcgacacaagcacggagcgctgggagaaaaaagacggacagtggatg
ccggaagtaatctcggaagagacgaaggaggcggtcacgttcctgcatcaaatgtataac
gagaaaatgctcgaccctgaattcatgctgaacacggacgacaaaaaaatcgagaagttc
gtgaccggcaaagtcggaatgatcattcataatgccaacgcgactttctataacgacatt
tacaacaagtttaatcaggctaagcccgaggcggaccctaagtcgatcttcacctgggtt
ggcacactgaagggcaagacgggcattcagcgcatggacggcttcaataacttctggtgc
gagacttcgatcaacgccggcatctccgaagagaaacggcagaaggcgctggaattgctg
gattacctgctctcggacgaggggcaagacctgatgctcaacggagtcgaaggcgttcat
tacaagaaggacggagacactgtcgtctcgctgatgaccgacgaggagaaaaccaaggac
aaaggcttcagtcttaaagctttggtatcctggaataccgactacttgccggacactacg
cccaacaaagaggaaatcgtagccttgtccaagtctacgggcgattacgccgtttccaat
ccgcttgcgtacttgaatatcgacgaggatgctctcgatccaagcattcctaatcaactg
acagacttcgtgaacgaggagattgttaaactgatcgccaactccaaagacgtcgccgcg
gattttgacaaattcaaggaagcctggctgtccaagggcggcgccaaggtgatcgaggaa
acgaacaagcaagcgacgactgaaggtcgttaa
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