Cohnella sp. LGH: J4772_08555
Help
Entry
J4772_08555 CDS
T10185
Name
(GenBank) family 78 glycoside hydrolase catalytic domain
KO
K05989
alpha-L-rhamnosidase [EC:
3.2.1.40
]
Organism
cohl Cohnella sp. LGH
Pathway
cohl00946
Degradation of flavonoids
cohl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cohl00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00946 Degradation of flavonoids
J4772_08555
Enzymes [BR:
cohl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.40 alpha-L-rhamnosidase
J4772_08555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_rhamnosid6H
Bac_rhamnosid_N
Bac_rhamnosid
Bac_rhamnosid_C
Motif
Other DBs
NCBI-ProteinID:
QTH44427
LinkDB
All DBs
Position
complement(2115879..2118596)
Genome browser
AA seq
905 aa
AA seq
DB search
MNLNHRVSFPTTWLVYGTSPCSHIREEAIPMIKVSSLTTEYAMNPLGTDKSNPRLGWINE
SMQRGQRQTAYRILVSAIAQNLDSEIGEVWDSGKCASDRCVSIDYSGEKLQSATRYYWKV
CVWDEKDRISTWSPIAWWETGFLHTEDWSGVWLSSDSEHAPLFRSEFQVDKLLKQARLYI
SAAGYCEAYLNGSKVGDHKLEPAFTVYNKRNLYHVYDVGAQLVAGKNCVGVELGRGFYGL
QTPNVWNWHRVKWNDNPRFIAQLVIQYIDGTVLLVKTDDRWELIGEGPTISDSIFAGEQY
DARKCRTNWSKAGFNAAETIKPKVVPAPSRRLETQSMPPIRVVGQVDAAKMTVLGEGHYV
FDMGDTIAGWVETNIQGGGSGQSVSFIYGEKLDETGRVDNRQIAIEAEIQTDHYIKSSER
AEKWEPKFSYKGFRYVEIIGQGIRLSLSDVVGKRVHTDLRSTGQFQCSNILFNWIHEATR
KTLLNNFHGIITDTPKYEKNGWLGDAQLIAETAAFQFDMALFWEKWLIDMRDSQRDDGYI
PVMIPDSGWGDFHAPEWSSAYVLIAWRLYWYYDDVQVLREHYGNLKRYVEYEIALLDRGM
SSSDLGDWLAPGYPEGRSPEGGQLTSSFHLHLVLRTMTDIAGILGFSMDSERYGKLAEET
AEAINRDCLDLENGLYYTNKATGYRQTSNILPLALSVVPSNVERLVENRLLHDIERRSNG
HADVGIIGHKYFYPTLTRLGYGEAAYRAATQLTYPSIGLWFQQEATALWEYWDVNTRSRN
HYMFGTIVQWFYEYIAGIRQTAAGWSEMEVKPYPLGDLTSAEATLDTVKGIIHVAWIRTV
DISFKLTVHVPVQSRARVHVPVLPAGQITENGLPADQASGIRYIKDENGYRVYEIEAGRY
AFASR
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
ttgaaccttaatcatcgagtatctttcccaacaacttggctggtttatgggacatcccct
tgttctcatataagagaggaagctattcctatgattaaggtaagttcgctgacaaccgaa
tacgcaatgaaccccttgggaacggacaagtccaatccccggcttggatggataaacgag
tctatgcagcgtgggcaacgtcaaacggcctatcgcattctggtttccgcaattgcacag
aatctggattccgaaatcggcgaagtatgggactccggaaaatgcgcgagcgaccgctgt
gtttctatcgactactcaggagaaaaactgcaatcggctacccgctattactggaaagta
tgcgtgtgggacgagaaggatcgtatttccacatggagtccaatcgcttggtgggagacg
ggcttccttcatacggaggattggtccggtgtgtggctctcatctgacagcgaacatgca
ccgctatttcgcagcgagttccaagttgacaagctcctcaaacaagccaggctgtatata
agcgctgccggttattgcgaagcgtatctgaacggcagcaaagttggggaccacaagttg
gaaccggcttttaccgtttataataaacgaaatttatatcatgtctatgatgtcggagcg
cagctggtggcgggaaagaactgtgtcggtgttgagcttggcagagggttttacggattg
caaacacccaatgtctggaactggcatagggtcaagtggaatgacaatccccggtttatt
gcccaattggtcattcaatacatagacggtaccgtgcttctcgtcaagacggacgatcgt
tgggagttgattggggaaggaccgaccatatccgattccatatttgccggtgagcagtac
gacgcaagaaagtgccggacgaattggagtaaagccggttttaatgccgcggagaccatt
aaaccgaaggtagttcccgcaccatcgcgacggctcgaaacccagtctatgccgccgatt
cgagtcgtaggtcaagtggatgctgcaaaaatgaccgttttgggggagggccattatgtt
ttcgatatgggcgacacgatagccgggtgggtggaaacgaatattcaaggtgggggatcg
ggacaatccgtctcgtttatttacggcgaaaagctggatgaaaccggccgtgtcgataac
cgccagattgcgatcgaggcggaaatacaaacggatcactacataaaatcaagcgagcgg
gctgaaaaatgggagcccaaattcagctataagggctttcggtatgtagagattattggg
caaggaatcagactgagcttgtctgatgtggttggcaaacgcgttcataccgatttgcgg
tcaacgggacaatttcagtgctccaatattctgtttaattggattcacgaggcaacccgt
aagacgctgctgaacaattttcacggcattattaccgatacgcccaaatatgagaaaaat
ggctggcttggcgatgcccagttgattgccgaaacggctgcctttcagtttgatatggcc
ttgttctgggaaaagtggctgatcgacatgcgcgattcccaacgggatgacgggtatatt
cccgttatgattcccgatagcggatggggggactttcacgcacctgaatggagtagcgcc
tatgtcctgatcgcctggcgtttgtactggtactatgacgatgtccaggtgcttcgggag
cattacggcaacttgaaaagatacgtcgaatatgagatcgccttgcttgacagaggaatg
tccagcagcgacttgggtgattggctggctcccggttatccggaaggacgttccccggag
ggaggtcaattgacttcctcgttccacctccatttggtgctgcgaacgatgaccgacatt
gcgggcatattgggattttcgatggatagcgagcggtacgggaaattggctgaagaaacg
gctgaagccataaaccgcgattgtctcgatctggagaatggactttactatacgaataaa
gcaacgggatatcggcaaacgtcaaatatactgccgcttgcactctcagtcgttccctcg
aatgttgaaagactggtcgagaaccgcctgctccatgatattgaacgacgatcgaacggt
catgctgatgtgggtattattgggcataagtatttttacccgactctgacacgtttggga
tatggagaggcagcctatcgggcagcgacgcagcttacttatccgagcatagggctatgg
tttcaacaggaagcgactgcgttatgggaatattgggatgttaacacacgttcgagaaat
cattatatgttcgggaccatcgtgcaatggttttatgagtatatagccggcattcggcaa
actgcagccggttggtccgaaatggaggtcaagccttacccgcttggcgacctaacgtcg
gccgaagcgacgcttgacacggtcaaagggatcattcatgttgcatggatccgtacggtg
gacatctcgttcaaactgacggtgcatgtcccagttcaatcgcgtgcaagggttcacgtt
cctgtattaccggcagggcaaataacggaaaatgggttgccggctgatcaggccagcggc
attcgatatatcaaagacgaaaacggatatcgggtatatgaaatcgaagcaggtcgttac
gcattcgcaagcagataa
DBGET
integrated database retrieval system
