Cohnella sp. LGH: J4772_10565
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Entry
J4772_10565 CDS
T10185
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
cohl Cohnella sp. LGH
Pathway
cohl00300
Lysine biosynthesis
cohl00470
D-Amino acid metabolism
cohl01100
Metabolic pathways
cohl01110
Biosynthesis of secondary metabolites
cohl01120
Microbial metabolism in diverse environments
cohl01230
Biosynthesis of amino acids
Module
cohl_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
cohl_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cohl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
J4772_10565 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
J4772_10565 (lysA)
Enzymes [BR:
cohl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
J4772_10565 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QTH44795
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Position
2592245..2593576
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AA seq
443 aa
AA seq
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MFLHGTSKINSKGHLEIGGCDVTDLAKQFGTPLYIVDEALVRQRAREFMEAFRATGMRHQ
VAYASKAFCVMAMCRVAEEEGMSLDVVSDGELYTALQAGFPAERIHFHGNNKTPEEILMA
LEANIGCFVVDNFNELHLLNALAGEQGKRVNVLLRITPGVEAHTHDYISTGQQDSKFGFD
LGNGTAFQAIETAISLPNLQVLGVHSHIGSQIFEVEGFRMAVEKVSAFAVEIRDKLSHTF
TVLNLGGGFGIRYVEGDQPLPLGTYVQAIADAVRTTCEQASFPLPEIWIEPGRSIIGDAG
TTLYTVGTSKDIPGVRKYIAVDGGMTDNPRPALYESKYEALLANRANDAAEEVVSVAGKC
CESGDMLIWDLNLPAVQSGDLLAVFCTGAYNYAMASNYNRIRRPAVVFVKDGQADLVVAR
ETYENIVGNDVIPARLQKQAVAK
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgcatggtacgagcaaaataaacagcaaaggtcatctggaaatcggaggatgc
gacgttacggatttggcgaagcagttcggcactccgctatatattgtcgatgaggcgctg
gtgcgtcagcgcgcccgcgaatttatggaagctttccgcgcgacgggcatgcgtcatcag
gtggcttacgcctccaaggcgttctgcgtcatggcgatgtgccgcgtggccgaagaagaa
gggatgagcctcgacgtcgtgtccgacggcgagttgtatacggcgctgcaagccggtttc
ccggccgagcgcattcatttccacggcaacaacaaaacgccggaagagattttgatggcg
ctggaagcgaacatcggctgttttgtcgtggacaactttaacgagctgcacctgctgaat
gccttggccggagagcagggcaaacgcgtaaatgtgctgctgcgcattacgccgggagtc
gaggcgcatacgcacgattatatttccaccggtcagcaggactccaagttcggcttcgac
ctgggcaacggcacggcgttccaggcgatcgagactgcgatttccttgccgaaccttcag
gtgcttggcgttcattctcatatcggctcgcagattttcgaggttgaaggttttcggatg
gcggtcgaaaaagtatcggccttcgcggtcgagatccgcgacaagctaagccatacgttt
acagtgctgaatctcggcggaggcttcggcatccgctacgtggaaggcgaccagccgctg
ccgctcggcacttacgtgcaggcgatcgcggacgccgtccgcacgacgtgcgagcaagcg
agcttcccgcttccggaaatctggatcgagccgggccgcagcatcatcggcgatgcaggc
acgacgctctatacggtaggaacgagcaaagacattccgggcgtgcgcaaatatatcgcg
gtggacggcggcatgaccgacaatccgcgtccggcgctttacgagtccaaatacgaggcg
cttctagccaaccgtgccaacgacgcagcggaggaggtcgtctccgtcgcgggcaaatgc
tgcgagagcggcgacatgcttatctgggacttgaacctgccagccgttcaatccggcgac
ctgctcgccgtgttctgcacgggagcttacaactatgcgatggccagcaactacaatcgc
atccgtcgccctgccgtcgtattcgttaaggacggccaagcggatctcgtcgtcgctcgc
gagacgtacgagaacatcgtcggcaacgacgtcattccggcccgcttgcagaagcaggcg
gtcgcgaaataa
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