Cohnella sp. LGH: J4772_12490
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Entry
J4772_12490 CDS
T10185
Name
(GenBank) efflux RND transporter permease subunit
Organism
cohl Cohnella sp. LGH
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QTH45146
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Position
2963192..2966296
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AA seq
1034 aa
AA seq
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MKAIIDFSMNKVAAMVIMIVIVFGAGAYSGSSLKVENMPEFSFPFVAISTTYQASPQDVM
SQVTKPIEDKIANVPGLRMLSSTSSDSFSSILLQFNEKVDIDKTKQDLESLVQDVNLPQS
ASRPKVSTFGMSSEPVYYMAMYATDSMSQTELDQLFEKEMKPRFEAIGGIDHMDAIGARK
SSLDIQLDAGALAAYQLSPSEVNASIQAAVANGSVGVVKFNGNTQMTRVTGKLNSLYELK
NLEIATATGTTVQLKDISKIEAVNESNFIARLDDKPAIGIHLYKTADTNAVQFSDAVQAL
IRGWEQTNPEVTFKTLYDSASEVKGSIKGLVKEGVMGIVLAALMILFFLRNLRMTLIVVV
SIPLSILLTLVMMKYMNITLNIMSLGGMFIAVGRVVDDSIVVIESIYANLQKAQKRNESV
IILAVKQVAMAISSSTLVTVGVFLPIGLVTGFIGALFRPFAITVSIALLASLLVSLTVIP
MLAKLMVLNNVKSTDAKEHDGGKMERWYEKTLVWSLKHKVVTLLLSGFLLIVTIVGTIPF
LPMGLLPYSPPPKQMNYSIQLPNDTTFASTDLQARQIEALLKDAKNESGGPQFTFVEALV
GYAGDAKERVPSYLQIITEVDADADTKAVQDRYQKLILAQLPKGTEVMPGSFSEGSSGPS
GPDFTYVIFGDDQKTLAQVAEQIKGKMKPFSELKEIKDNLGDGKKEVQITVDPNKARQFG
LDVPRIQGLTAEWIGRSPLGDVRLDNTLYQAAVELAPQDKNSLQQLGQMPIRTANGSVVY
LNEVAHLEEVDSPTAFQRESQKLMVSLTAKIDSADKATVTNAVLSAIQEVEFPSGVTNTI
RGTNIDMMEGFSQMFVAMGVAVAIVYLIMVLCFGNAGTPFAILFSLPLAVIGGLLGLVVA
GESLNMTSMIGFLMLIGIVVTNAIVLLDRAQQLRKEGYMVRPALIEAGKVRLRPIIMTAG
ATIAAMVPLTLGLTKGLLISKSLAVVVIGGLITSTILTLVVVPIVYEMIESFKARMSRLF
NRKGKVSPGQELNV
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggcaatcattgatttttccatgaacaaagtcgcggcgatggtcattatgatcgtc
atcgtgttcggggcgggggcatattcgggcagttcgttaaaggtagagaacatgccggaa
ttttcgtttccgttcgtcgcaatctccaccacgtatcaagcctcgccgcaggacgtcatg
agtcaggtgacgaaaccgattgaagacaaaatcgccaatgtccccggactgagaatgctc
tcctcgacttcaagcgatagcttctcgagcatacttctccagttcaacgaaaaggtcgac
atcgataaaacgaagcaggatttggaaagtctcgttcaggatgtaaacctgccgcaatcg
gcaagcaggccgaaagtttctacattcggaatgtcatcggagcccgtgtattatatggcg
atgtacgcgacggattcgatgtctcagaccgagctggatcagctgttcgagaaggagatg
aagcctcgtttcgaagccattggcgggatcgaccatatggatgcgatcggagcgcgcaaa
tcctcgctcgatatccagttggacgcgggcgctctggccgcctatcaattaagtccttcg
gaagtgaacgcctcgatccaagccgccgtggcgaacggttcggtgggggtcgtgaaattc
aacggcaacactcagatgacccgcgtaacgggaaagctgaacagcctgtacgagctgaaa
aacctggaaatcgccacggctacgggcactacggtacagctcaaggacatctcgaagatc
gaggcggtgaacgagtccaactttatcgcccgtctggacgataagcccgcaatcggcatc
catctgtataagacggccgatacgaacgccgtccagttttccgatgccgttcaagctttg
attcgcgggtgggaacagacgaatccggaagtgacgttcaagacgctgtacgacagcgcc
agcgaagtcaaaggctcgatcaaaggactggtcaaggaaggggtaatgggcatcgttctg
gccgccctgatgatcttgttcttcttgcgcaacctgagaatgacgctgatcgtcgtcgtg
tccattccgttatcgattctcttgactctagttatgatgaagtacatgaacattacattg
aacattatgtcgcttggcggcatgttcatcgccgttggccgggtcgtagacgacagcatc
gtcgttatcgaaagcatatacgcaaatttgcaaaaggcccagaagagaaacgagtcggtg
attattctcgcggtgaagcaggtggccatggcgatcagttcgtccaccttggtcacggtc
ggcgtgtttctaccgatcgggctcgttacgggctttatcggcgccttgttccgtccgttc
gcgataacggtgtcgatcgcgttgctcgcatcgctgctcgtctcgttaacggtcattccg
atgttggccaagctcatggtgctgaacaacgtcaagtcgacggacgccaaggagcacgat
gggggcaaaatggagcgttggtatgaaaagacgctcgtatggagcttaaagcacaaagtt
gtcacgcttctgctttcgggatttttgctaatcgtaacaatcgtgggcacgattccattc
ctgccgatgggactcctgccgtattcgccgccgccgaagcaaatgaactattcgatccag
ttgccgaacgacacgacgttcgccagcaccgatcttcaggcgaggcagatcgaagcgctg
ctgaaggacgcaaagaatgagagcggcggaccgcaatttacattcgtggaggcgctcgtc
ggatatgcgggcgacgctaaggaacgcgtgccgagttatttgcagatcattacggaagtc
gatgccgacgcggatacgaaagccgtccaggatcgctatcaaaagcttattctggcccaa
ctcccgaaaggtacggaagtcatgcccggttcattctcggagggcagcagcggaccgtcg
ggtcccgattttacgtatgtcattttcggagacgaccagaaaacgctggcacaggtcgca
gagcaaatcaaaggcaaaatgaaaccattttccgagcttaaagaaatcaaggacaacttg
ggagacgggaagaaggaagtacaaattacggtcgatccgaacaaggcgcgtcaattcgga
ttggatgtcccgagaattcaaggcttgacggccgaatggatcggcaggtccccgctcggc
gacgttcgcttggacaacacgttatatcaggcggcagtcgagcttgcgccccaagataaa
aactcgctgcagcagctagggcaaatgccgattcggacggcaaacggcagcgtcgtgtat
ttgaacgaagtcgcccatctcgaggaagtggattctccgacagccttccaacgggaaagc
cagaagctgatggtgtcgctgacggccaagatcgattcggcagacaaagctacagtaacg
aacgcggtgttgagcgcgatccaggaagtcgaatttccgtcgggggtaacgaatacgatt
cgcggtacgaacatcgatatgatggagggctttagtcagatgttcgtcgccatgggcgtt
gccgttgcgatcgtctatctgatcatggttctctgcttcggcaacgcgggcactccgttc
gcgattctgttctccttgcctttagcggtcatcgggggcttgctgggactggttgtagcc
ggggaatcgctcaatatgacgtcgatgatcggatttcttatgctgatcggcatcgtcgtc
acgaatgcgatcgtgttgctggaccgcgcccaacagctgcgtaaagaaggctatatggtg
cggcccgctctcattgaagccggcaaagtacggttgcgtccaattattatgacggcagga
gcgaccatcgcggccatggttccgttaacgctaggtttaaccaagggactattgatctcc
aagtcgcttgccgttgtcgtcatcggcggactgatcacatctacgattctgacgctggtc
gtcgtgccgatcgtgtacgagatgattgaatcgttcaaggcgcgcatgagccgtctgttt
aaccgcaaaggaaaagtatcgcccggacaagaactcaacgtataa
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