Cohnella sp. LGH: J4772_12560
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Entry
J4772_12560 CDS
T10185
Name
(GenBank) FadR family transcriptional regulator
KO
K05799
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
Organism
cohl Cohnella sp. LGH
Brite
KEGG Orthology (KO) [BR:
cohl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cohl03000
]
J4772_12560
Transcription factors [BR:
cohl03000
]
Prokaryotic type
Helix-turn-helix
GntR family
J4772_12560
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FCD
GntR
HTH_41
TrmB
DUF4423
HTH_Crp_2
Fe_dep_repress
Rrf2
HTH_DeoR
HTH_IclR
Choline_kinase
HTH_5
HTH_36
LexA_DNA_bind
HTH_11
HTH_24
FGAR-AT_PurM_N-like
Motif
Other DBs
NCBI-ProteinID:
QTH45160
LinkDB
All DBs
Position
2981461..2982168
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AA seq
235 aa
AA seq
DB search
MAITRLTKRNHYEEIKDQLMGMILDGRFKVGDKLPSTKEMSESFGVGRSTTREALSALKA
MGLIEIRQGGGCRVIRNAPAEAAVPELDSLRLNRSTLLELLEARQSLEVSNAAIAAVKRT
DADMAEFEALMHAMEQTVGQELEGERTDVLFHLTLAKATHNSIMVRLFESIVGQLESAIR
DIRRVEIYSNQQVAEQLYREHSAIYEAVRLRDQERAAQTMKRHLEHVENILTKYI
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggcgataacccggttaacgaaacggaatcattacgaggagatcaaggatcagctcatg
gggatgattctggacggcagattcaaggtcggcgataagctgccgtcgacgaaggaaatg
tcggaaagcttcggcgtgggtcgttcgacgactcgcgaagcgctaagcgcgctcaaggcg
atgggactcatcgagatccgacaaggcggcggctgccgagtgattcgcaacgccccggcc
gaagcggccgttcccgagctagattcgctccggctaaaccgcagcactctgctggagctg
ttagaagcgcggcagtcgctggaagtgtccaatgccgcaatcgctgccgtcaagcggact
gacgccgatatggccgaattcgaagcgttgatgcacgcaatggaacagacggtcgggcag
gagctggaaggggaacgcacggacgttctgttccatctcacgttggccaaggcgacgcac
aattcgattatggttcgattgttcgaatcgatcgtcggtcagctggaatctgcgattcgc
gacatccgcagagtcgaaatctactccaatcaacaggtggccgaacagctctaccgggag
cattccgcgatctacgaggctgtccgtctacgcgatcaggagcgggccgctcagacgatg
aagcgccacttggagcatgtagagaacattttgacgaaatatatttaa
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