Cohnella sp. LGH: J4772_13425
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Entry
J4772_13425 CDS
T10185
Name
(GenBank) extracellular solute-binding protein
KO
K17318
putative aldouronate transport system substrate-binding protein
Organism
cohl Cohnella sp. LGH
Pathway
cohl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cohl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
J4772_13425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cohl02000
]
J4772_13425
Transporters [BR:
cohl02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative aldouronate transporter
J4772_13425
SSDB
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Paralog
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_11
DUF6480
MED16_helical
Motif
Other DBs
NCBI-ProteinID:
QTH45315
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Position
3164102..3165820
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AA seq
572 aa
AA seq
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MKLRPTSKSCLILSAAVLLLLGSATGCQTGGSRQSGESPSEASADPAATQTQQEGSAKSP
VTLTTFFNVAENSSIPWNWGKDPVSKEITKRTGVTIEPVFGDNDSQKLKLMLASGEKLPD
ILVYVNPTTQLYKDLVDGDYVYALSDLIEKYDPGMKDMLMKGELEFNQEDDGKLYYLVSN
IFGYDELKDPRLSATGQWAIREDLHKSLGSPSMKTPEELMQVLEQAKAKFPDMKYPLFLP
ELFLYSNPWPIYQSFGGHSTIDGKYYDEKNKTVGYWYEDEIGKKSLKYLNQLYAKGLINP
EAFTLKDWSLPLNTGDVFLLGIWNYFAISGANGSLQKIDPEMSYTPVEPVIANGVDNYEV
PIWYSTKSGRTAMITKDAKDPAKALEYLKFMISDEGQKLALYGLEGVTYNMEKDESGEYP
VFADEVGKLFSTDFTKMVNTYGVYNYFNYAWIIKNKYDNAVVYANTKKDPLAQKTRNFYQ
KYKVGLKSEYLTNAIFIKPGSDEANIEIKLSDVVKKYIFQTITAKSDEQFESLYAEFMGK
TQEVGIDKLKAYYATEAGKYAERLAANGVVLE
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgaagctaaggcctacatccaaatcctgcttgatcctgagtgctgccgttttactgctg
ctcggcagcgcgaccggctgtcagacgggcggcagccggcaaagcggcgaatccccaagc
gaggcgagcgccgatcccgccgcaacccaaacgcagcaagaaggttccgccaaatcgccg
gtcaccttgaccacgttttttaatgtcgcggaaaatagttcgatcccttggaattggggg
aaggaccccgtgtcaaaggagattaccaaaagaaccggcgtgacgatcgagccggtattc
ggagacaacgacagccagaagctgaagcttatgctggcctctggcgagaagctgccggat
attctggtgtacgtgaatccgacgactcaactgtataaagacctggtcgatggcgattat
gtgtatgccctcagcgacttgatcgaaaagtacgacccggggatgaaagacatgctgatg
aaaggcgaactggaattcaatcaggaggacgacggcaagttatattacctggtatccaat
atttttggctacgacgagcttaaagacccaagattgtcggccacggggcagtgggccatc
cgggaagatttgcacaaaagtcttggaagcccttccatgaaaaccccggaggaattgatg
caggtgctcgaacaggcaaaagccaagtttccggacatgaagtatccgctcttcctgccc
gagcttttcctatacagtaatccttggccgatctatcaaagctttggcggacacagtacc
atcgatggcaaatattacgacgagaaaaacaaaacggtaggctactggtatgaggatgaa
atcggtaaaaagtcgctcaaatatttgaatcagttgtatgccaaaggcttgatcaacccc
gaggccttcacgcttaaggattggtcgcttccgcttaatacaggagacgtattccttctg
ggaatctggaattacttcgccatctcgggggcgaacggcagcctgcagaagatcgacccg
gagatgtcttatacgccggtcgaacctgtcatcgcgaatggcgtcgacaattatgaagtg
ccgatctggtactccaccaagagcggaagaaccgcgatgatcaccaaagacgccaaagat
ccggccaaagctctggaataccttaaattcatgatcagcgatgaaggccagaagctggct
ctctatggcttggaaggcgtcacctacaacatggaaaaggacgaaagcggcgagtatccg
gtatttgcagacgaggttggaaaattgttcagcacggatttcaccaagatggtgaatacg
tatggcgtgtacaactacttcaattacgcatggatcattaaaaacaagtatgacaatgcg
gtcgtgtatgccaataccaagaaagatccgcttgcccaaaaaaccaggaacttctaccaa
aagtacaaagtcggcctaaaatccgaatacctaacgaatgccatctttatcaagcccggt
tcggacgaagccaatatcgaaatcaagctgagcgatgtcgtcaagaagtacattttccag
acgataacggccaaatcggatgaacaattcgagagtctgtacgccgagttcatgggcaaa
acgcaggaagtcggcatcgacaaattaaaagcctattatgcgacagaggccggcaagtat
gcggagagactggcggcaaacggcgtagtcctggaataa
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