Cohnella sp. LGH: J4772_14535
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Entry
J4772_14535 CDS
T10185
Symbol
abc-f
Name
(GenBank) ABC-F type ribosomal protection protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
cohl Cohnella sp. LGH
Pathway
cohl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cohl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
J4772_14535 (abc-f)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cohl02000
]
J4772_14535 (abc-f)
01504 Antimicrobial resistance genes [BR:
cohl01504
]
J4772_14535 (abc-f)
Transporters [BR:
cohl02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
J4772_14535 (abc-f)
Antimicrobial resistance genes [BR:
cohl01504
]
Gene variants
Macrolide resistance genes
Transporters
J4772_14535 (abc-f)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_23
AAA
Dynamin_N
RsgA_GTPase
AAA_15
KAP_NTPase
Roc
AvrM-A
DUF4024
Motif
Other DBs
NCBI-ProteinID:
QTH45520
LinkDB
All DBs
Position
complement(3414641..3416119)
Genome browser
AA seq
492 aa
AA seq
DB search
MSLIHVKNLTFAYEGSYDNIFDNVSFQIDTDWKLGFTGRNGRGKTTFLKLLLGKYEFEGT
IHANVDFEYFPFPVRNRSSNTLDVIDEILPDYEYWQLSRELSLLKMTDDALYRPFDSLSN
GEQTKVLLAALFLKENSFLLIDEPTNHLDLNGRQIVSDYLKAKKGFILVSHDRAFLDNCV
DHILSINKTNIEIQRGTFSDWWDNKQRQDNFELAENDKLKKDIKRLSDAAKRTGKWSDEV
EKSKTGIKNADFFVDRGYIGHKAAKMMKRSKSMERRQQEAIDEKSKLLKNIESSEHLKLA
QLAYHKSRLVELDRVSIRYGDRRVCEDVSFAVEQGDRIALIGANGSGKSSILKLVCGEQI
DYEGAVRTGSQLKISYVSQDTSHLRGNLTDYARSFGIDESLFKSILRKLDFARVQFDKDI
SAYSGGQKKKVLIARSLSEQAHLHVWDEPLNFVDVISRMQIEELLLEHSPTLLFVEHDRE
FCDNIATQVVRL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaattcatgttaaaaatctaacgtttgcctacgaaggcagctacgataacatt
ttcgacaacgtcagctttcagatcgataccgattggaagctgggattcacgggaagaaac
ggcagaggaaagacgaccttcctcaaactgctgctcgggaaatacgaattcgaaggaacg
attcatgccaacgtcgattttgaatactttccgttccccgtacgcaacaggtcgagcaat
acgctggacgtcatagacgaaattttgccggattacgaatattggcagctgtcgcgcgag
ctttcgttgcttaagatgaccgatgacgcgttgtataggccgttcgattccctttccaac
ggagaacagacgaaggtgctgctcgccgcgctgtttcttaaggaaaatagcttcctgcta
atcgacgagccgacaaaccatttggatctgaacggcagacaaatcgtcagcgattacttg
aaagccaagaaaggctttatcctcgtttcgcacgacagagcttttctcgacaactgcgtg
gaccatattttgtcgatcaataagacgaacatcgagatacagcgcgggaccttctccgac
tggtgggataacaagcagcgccaggacaatttcgagctggccgagaacgataagctgaaa
aaggacattaagcgtctgtccgatgcggccaaacggaccggcaagtggtcggacgaggtg
gagaaatcaaaaaccggcattaagaacgccgattttttcgtagacagaggctatatcggc
cataaggccgcaaaaatgatgaagcgctccaaatcgatggaacgcaggcagcaggaagcg
atcgacgaaaagtcaaagctgcttaaaaatatcgaaagctcagagcatctaaagcttgct
cagcttgcttatcataagagtaggctcgtcgagttggaccgcgtatcgatccgctacggc
gacaggcgggtatgcgaggacgtcagctttgcggtcgagcagggggacagaatcgcgttg
atcggagcgaacggctcgggcaaatcgagcattctcaagctggtttgcggagagcaaatc
gattatgaaggcgcggtcagaacgggcagccaactgaaaatctcttacgtttcgcaggat
acttcgcatttgcggggcaacttgacggactatgcgcgaagcttcggcatagacgagagt
ctgttcaagtcgattttgcgcaagcttgattttgcccgagtccagttcgacaaggacatt
tccgcttacagcggggggcagaagaaaaaggtgctgatcgccagaagcttgagcgaacag
gcgcacctgcacgtatgggacgaaccgcttaacttcgtggatgtcatctcgcgcatgcag
atcgaagagctgctgctcgagcactcgcctacgctgctgttcgtggagcacgacagggag
ttttgcgacaatattgcgactcaggtggtgcgtttataa
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