Cohnella sp. LGH: J4772_14580
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Entry
J4772_14580 CDS
T10185
Name
(GenBank) glycoside hydrolase family 52 protein
KO
K22268
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
cohl Cohnella sp. LGH
Pathway
cohl00520
Amino sugar and nucleotide sugar metabolism
cohl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cohl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
J4772_14580
Enzymes [BR:
cohl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
J4772_14580
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_52
Motif
Other DBs
NCBI-ProteinID:
QTH45527
LinkDB
All DBs
Position
complement(3423351..3425459)
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AA seq
702 aa
AA seq
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MNLFYNAHHSPIGAFASFTLGFKGAAGGLGLELGKPADHNVYIGVESENGKRLYRSLPFF
ESAVDESRRYDVEKEADDDAAGPRIYPYSGDDIRRELRLGTDTWEAEDLVFRIYSPAHAV
PDPERASPEELKDALLPAVFAELTVDNRKSSKNRRAFFGYRGSDPYANMRRLDDTTNGKM
KGVGQGLITAIATDDSSARSAMGFGMERILGAELEENWTFGLGMTGAIVTDVPAGEIRTV
RFAICFYRGGVATSGMETSYYYTRLFRNIEEVADYALAHFDRLTEACAAADEEVEASGLN
DSQKFMLRHSVHSYYGNTQLLADKDGKPLWVVNEGEYRMMNTFDLTVDQLFFEMKLNPWT
VRNVLDQFVDRYSYEDQTRFPGESKLHPGGISFTHDMGVGNVFSRPSYSSYEMYGIDGCF
SHMTHEQLVNWILCAAVYDERSGDREWLQGKSGLLEACFQSMLNRDHPDSDKRNGLMGLD
SSRTMGGAEITTYDSLDVSLGQSRNNLYMAGKCWAAYVAMEKLFARFGKPDLAVMAGSQA
ERCASTIAAQLNEQGYIPAVIGEGNDSKIIPAIEGLIFPYMTGNEEALDRNGRYAPYLQA
LRTHLDHVFSSGACLFPDGGWKLSSTSDNSWLSKIYLCQFIARRIMGVDFGDGGIAADKA
HVSWLTHPELSYWSWSDQILAGNIIGSKFYPRGVTSVLWLEE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttttttacaacgcgcaccattcgcctataggagccttcgccagctttactttg
ggttttaaaggagcggcgggaggactgggcctggagctgggcaagccggcggaccataat
gtgtacatcggagtggagtcggagaacggcaagcggctttatcgctcattgccatttttc
gaaagcgctgtcgacgagagcagaaggtatgacgtggagaaggaagcggacgacgatgcc
gccggcccgcgtatttatccctattccggcgatgatattcgtcgagagcttcgtctgggc
accgacacatgggaagcggaggacctcgtgtttcgcatctattctcccgcgcatgccgtt
ccggatccggagcgcgcctctccggaggagctgaaagacgcgctgcttccggcggtgttc
gccgagctgaccgtcgacaatcgcaagagctcgaagaaccgcagagctttcttcggatac
cggggcagcgacccttacgcgaacatgcggcggctggacgatacgacgaacgggaaaatg
aagggagtcgggcagggactgattaccgcgattgcaaccgacgactcctcggcgcgctcg
gcgatgggcttcggcatggaacggattcttggcgccgagctggaggaaaactggactttc
ggactcgggatgacgggagcgattgttacggacgtgcctgcaggggaaatccgcacggtc
cgcttcgcgatctgtttctaccgcggtggcgttgcgacatcggggatggagacgagctat
tattatacgaggctgtttcgcaacatcgaagaggtcgccgattatgcgctggcgcatttc
gatcggttgacggaagcttgcgcggccgcggatgaggaggttgaggcctccggactgaac
gatagccagaaatttatgctgcgccattccgtccacagctactatggcaacacgcagctg
ctcgcggataaggacggcaagccgctttgggtcgtcaacgagggcgaataccggatgatg
aatacgttcgatctgactgtggatcagctgtttttcgagatgaagctgaacccgtggacg
gttcgcaacgtgctcgatcagttcgtcgatcgctacagttacgaagaccaaacccgtttc
cccggagaaagcaagcttcatcccggagggatcagctttacgcacgacatgggcgtcggc
aatgtcttttcgcgcccgtcgtattcttcctacgaaatgtacggcatcgacggttgcttc
tcgcatatgacgcatgagcagctcgtcaactggattctatgcgccgcagtgtacgacgag
cgttccggagaccgggaatggctgcagggaaaatcaggtctgctagaggcctgcttccaa
agcatgctcaaccgggatcatcccgattcggacaagcgcaacggactgatggggctggac
agctcccgcacgatgggcggggccgagattacgacgtacgacagcctcgacgtgtcgctc
gggcagtctcgaaataatctgtacatggccggcaagtgctgggcggcctatgtcgcgatg
gagaagctgttcgctcgcttcgggaagccggatctggccgtgatggccggaagtcaagcg
gagaggtgcgcatccacgatcgccgcgcagctcaacgaacagggctatattccggcggtc
atcggcgaaggcaacgactctaagatcattccggcgattgaagggttgattttcccttac
atgacggggaacgaggaggcgctggaccggaatgggcgttacgcgccctacttgcaggcg
ctgcggacgcatctggatcacgtgttctcgagcggcgcctgcctgttcccggacgggggc
tggaaactgtcgtcgaccagcgataactcttggctcagcaaaatttatttatgccagttt
atcgcccgccgcattatgggcgtcgatttcggcgacggcggcatcgcagccgacaaagcg
cacgtaagctggctgacgcatcccgagctgtcttattggagctggagcgatcagattctc
gccgggaatatcatcggcagcaagttttatccgagaggcgtaaccagcgtcctttggctg
gaagaatag
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