Cohnella sp. LGH: J4772_16260
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Entry
J4772_16260 CDS
T10185
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cohl Cohnella sp. LGH
Brite
KEGG Orthology (KO) [BR:
cohl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cohl03009
]
J4772_16260 (rimO)
Enzymes [BR:
cohl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
J4772_16260 (rimO)
Ribosome biogenesis [BR:
cohl03009
]
Prokaryotic type
ribosomal protein modification factors
J4772_16260 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
QTH45837
LinkDB
All DBs
Position
complement(3805632..3806960)
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AA seq
442 aa
AA seq
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MVEKVSVVTLGCEKNLVDSEIMSGLVHQRGFKLVEKPEDATVVIVNTCGFIDAAKEESVN
TILNLAELKETARLKALIVSGCLTQRYKKELMDEMPEIDGIVGTGDFFRINDIIDEALRG
AKPVYVGNPVFNYEEAMPRILSTARHTAFVKIAEGCDNACTFCSIPIMRGKFRSRSIESI
LAEVDNLAKQGVKEVSLIAQDSTNYGTDLYEGFRLPELLNRVSEVPGIEWVRLHYAYPGF
FTDELIETIAANPKVCDYIDMPLQHSEDAILKRMRRPGRQRDVRELVGKIRSRIPDVALR
TSMIVGFPGETEEEFERLCEFVREIKFDRLGVFTYSQEEDTPANRLPNQVPDEVKQFRAN
TLMEIQREVAKENAAKYVGRTMDVLVERYDGRSDVYIGRSQYDAPEVDGEVFITNCPVEI
GQMSKVRITHAYEYDLSGEGIA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggtagagaaggtcagtgtcgtcacgctgggttgcgagaaaaatttggtcgactccgag
attatgtcgggactcgtccaccaaagaggctttaagctggtagagaagcctgaggatgcg
acagtcgttatcgtaaatacgtgcgggtttatcgacgcggctaaggaagagtcggtaaat
acgattttgaatttggcagagttgaaagagacggctcgccttaaggcgctcatcgtgtcg
ggctgcttaacgcagcgttacaagaaggaactgatggatgagatgccggagattgacgga
atcgtcggaacgggcgatttcttccggatcaacgatattatcgatgaagcgcttcgggga
gcgaagccggtctatgtcggcaaccccgtgttcaactacgaagaagcgatgccgcgaatt
ttgagcacggcgcgtcatacggcattcgtcaaaattgccgaaggctgcgacaacgcttgc
acgttctgcagcattccgattatgcgggggaaattccgcagccgctcgatcgaatcgatt
ttggccgaggtagacaatcttgcaaagcagggcgttaaggaagtcagcctgattgcacag
gactctacgaattatgggaccgatctgtacgaaggcttcaggttgccagagttgctcaat
cgggtaagcgaagtgccgggcatcgagtgggtgcgcttgcattatgcctatccgggcttt
ttcacggacgagttgatcgagacgatcgccgccaaccctaaggtgtgcgactatatcgac
atgcctctgcagcacagcgaggatgcgattctgaaaagaatgcgccggcctggccgtcag
cgcgacgtacgcgaattggtcggtaaaattcgctcccgaattccggatgtggcgctgcgc
acatcgatgattgtcggcttccccggagagacggaggaggaattcgagcggctgtgcgag
tttgtgcgcgagatcaagttcgaccggctgggcgtgttcacgtattctcaggaagaggat
actccggcgaaccggctgccgaaccaggtgccggacgaggtgaagcaattccgcgccaat
acgttgatggaaattcaacgggaggttgccaaggagaacgctgcaaaatatgtcggccgg
acgatggacgtgttggttgagcgttacgacgggcgcagcgatgtatacatcggccgcagc
caatacgacgctccggaagtggacggggaagtgttcattacgaactgccctgtggagatt
gggcaaatgagcaaggtgcggattacgcatgcatacgagtacgatttgtcaggggaggga
atcgcgtga
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