Cohnella sp. LGH: J4772_16375
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Entry
J4772_16375 CDS
T10185
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cohl Cohnella sp. LGH
Brite
KEGG Orthology (KO) [BR:
cohl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cohl03016
]
J4772_16375 (truB)
Enzymes [BR:
cohl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
J4772_16375 (truB)
Transfer RNA biogenesis [BR:
cohl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
J4772_16375 (truB)
Prokaryotic type
J4772_16375 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QTH45859
LinkDB
All DBs
Position
complement(3830871..3831830)
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AA seq
319 aa
AA seq
DB search
MTDGKRNWEGVLAIWKPAGWTSHDVVAKARRLLRERRIGHTGTLDPAVTGVLPLCVGRAT
RLVEYLQEAPKTYRAKLRFGIATDSEDLSGEIIERKDASFLTEPAIREAVLSFVGEIDQI
PPMVSAVKVDGKRLYELARQGITVERKARRVTIHRIDVDEVTAGTDEPEVTFTVACSKGT
YIRTLCVDIGRKLGVPAVMAELVRLESAGISQEHCVTLEEIPGLIEKGEMDGKLLAADRL
LTQLPSTSAAEQESRYALQGKGIRTERLRPVPDRQGLWKLYRSDGVFLGLFSVDETTEWI
RPVKVFHPSEDQPHDSQSD
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggcaagcggaactgggaaggcgttcttgccatttggaagcctgccggctgg
acgtcgcacgacgttgtcgccaaagcgaggcggctgctacgcgagcgccgcatcggccat
acgggaacgctggatccggccgtcacaggggttctgccgctgtgcgtcggtcgtgcgacc
cgtctggtcgaatatttgcaggaagcgcccaaaacgtatcgggccaaactcagattcggc
attgcgacagatagcgaagatctgagcggcgaaattatcgaacggaaggacgcttcgttc
ctgaccgaacccgcgatcagggaagccgtgctttcctttgtcggcgagatcgatcagatt
ccgccgatggtatcggccgtaaaggtcgacggcaaacggctgtatgaactggccagacag
gggataaccgtcgagcgcaaagctcgccgggtaaccattcaccgaatcgacgtggacgag
gtgacagccggcacggacgagcccgaagtgacgtttacggtcgcctgctccaaaggcact
tatattcgtacattatgcgtggacatcggacggaagctcggcgttccggcggtgatggcg
gagctcgttcgccttgaaagcgccggaataagccaggagcactgcgtaacgcttgaggag
attccggggctgatcgagaagggcgagatggacggcaagctgcttgcagcggataggctg
cttactcagctgccttcaacgagcgccgcggagcaggaatcgcgatacgcgcttcaaggc
aaaggaattcggactgagcggctgcggcccgttccggaccggcaagggttgtggaagctc
taccgctcggacggcgtttttctcggtttgttttccgtggacgagacgacggagtggatc
cgccccgttaaggtgtttcatccttcggaagatcagccgcatgacagtcagtccgattaa
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