Cohnella sp. LGH: J4772_16485
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Entry
J4772_16485 CDS
T10185
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
cohl Cohnella sp. LGH
Pathway
cohl02020
Two-component system
cohl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cohl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
J4772_16485
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
J4772_16485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cohl03021
]
J4772_16485
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
cohl02035
]
J4772_16485
Transcription machinery [BR:
cohl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J4772_16485
Bacterial motility proteins [BR:
cohl02035
]
Flagellar system
Flagellar assembly proteins
Stator
J4772_16485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
UPF0122
HTH_38
HTH_23
HTH_16
MarR
DUF7112
7TMR-HDED
Motif
Other DBs
NCBI-ProteinID:
QTH45881
LinkDB
All DBs
Position
complement(3855475..3856263)
Genome browser
AA seq
262 aa
AA seq
DB search
MVDQTRSRLSHQDLWQQWKDDADPDARKKLIEHYLPLVDYVSSRMAVGLPKNVTKDDLAS
NGAMGLIDAIEKFDYRRGLQFETYASWRIRGAIIDGLRQGDWVPRSVRDKAKKIEDAYAV
LEQQHLRSASDDEICDFLNISNKEFQQMLQEVAVAAVFSLEDPIREEESETRLSLLVDDK
AVSPESKVHETYLKDSLKYGIEKLTEKERIVISLFYYEDLSLSEIAEVMCLSPSRISQLH
SKAILRLRGALAKHKEQLLQNG
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggtcgatcaaacacgttcccggttatcccatcaagatttgtggcagcaatggaaagac
gacgcggacccggatgcgagaaaaaagctgatcgaacactatttgccgctcgtagattac
gtctcaagccgtatggcggtgggtttgcctaaaaatgtgacgaaagacgacctggcgagt
aatggggccatgggactgatcgacgcgatcgagaagttcgattatcggcgcggtttgcaa
ttcgagacgtatgcttcatggagaatcagaggggcgatcatcgatgggcttcggcaagga
gattgggtgccccgctcggttcgtgacaaagcgaaaaaaatcgaggacgcttatgcggtg
ctggagcagcagcatttaagatctgcttcggatgacgaaatatgcgactttttgaatatt
agcaacaaagagtttcagcaaatgctccaggaggttgcagtcgcggccgtattttctctc
gaagatccgatccgggaagaagaatccgagacccgtctgtcgctgctcgtcgacgacaaa
gcggtcagcccggaatccaaagttcacgagacgtatttgaaagactctctgaaatacggc
atcgagaaactcacagagaaagaacggatcgtcatttctctgttctattacgaagatttg
tctttaagcgagatcgctgaagtgatgtgcctgtcgccatcgagaatatcccaattgcat
tccaaagcgattttgaggcttcgcggagcgctcgcgaaacataaggaacaactgcttcaa
aacggataa
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integrated database retrieval system
