Cohnella sp. LGH: J4772_20945
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Entry
J4772_20945 CDS
T10185
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
cohl Cohnella sp. LGH
Pathway
cohl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cohl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
J4772_20945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cohl02000
]
J4772_20945
Transporters [BR:
cohl02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
J4772_20945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF6426
UBA_4
Motif
Other DBs
NCBI-ProteinID:
QTH46685
LinkDB
All DBs
Position
complement(4855590..4857164)
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AA seq
524 aa
AA seq
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MITLTACSGANNNAQSGSETGQAGQADQAEQTASQGASAEVPQEETELIVAGQEIAASLD
PVQPLTSSYLRNIGAAEALFKVDADGKVLPELADSATETDAHTWEIKLKPGIRFWSGRAL
DADAAIASLERSKSQDPQAQPFLKELTFAKADELTIRVSTEREHLPVPLNLSYYQTILHN
AEAKHDAVGTMDLTGMYRVVEFTPKQKMTLERNNDYWGQKPRIERVVYEEIADEQTRVLS
VLSGRSHVALNVSPTSLTQFKDGSEAEISATPAANTQTIYLNVSRPQLQDVRVRQALSWA
LNREELVVLAAEGQSFPVATWLSSNPAYAEARSAVYDKSDPEKAAQLLEEAGWQLGSDGI
RYKDGEPLTVRLMTWGGDKALGEALQNQWTQVGIQAEVRHGDYSLIETARESGDWDASIE
AWSTFGEEFALLSGQYSPQGSANYGGYDDKETQGLLSGLSEASDEETRRQLALRINEHVA
LQAPVVSLFPRPQITAVSKRLQGFVPHFRQFENVVNANLSLAAK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgattacacttacggcgtgctcgggagccaataataacgcacagtccggcagcgaaacc
ggccaagcgggccaagccgatcaagcggaacaaaccgcttcgcagggcgcgagcgcggaa
gtcccgcaagaggaaaccgagttgatcgtggccggacaggagatcgcagcctcgctggac
cccgtccagccgctgacatccagctacctgcgcaatatcggcgccgccgaggcgctgttc
aaggtggacgcggacgggaaggtcctgcccgagctggcggacagcgcgacggagacggat
gcgcatacatgggagatcaagctgaagcccggaatccgtttctggagcgggcgggcgctg
gacgccgacgcggcaatcgcttcgctggagcgctccaaatcgcaggatccgcaagcgcag
ccgttcctgaaggagctgacgttcgcgaaggcggacgagctgacgatccgggtaagcacc
gaacgggagcatctgcctgtgccgcttaacctgtcctactatcagacgatccttcacaat
gccgaggccaagcacgatgcggtgggtacgatggacctgaccgggatgtaccgggtagtc
gagtttacgcccaaacaaaaaatgacgttggagcgcaataacgattattggggacagaag
ccgcggatcgagcgggtcgtctacgaggagatcgccgacgagcagacgagagtgctgtcc
gttctgagcggacgaagccatgtcgccttaaacgtgagcccgacgagcctgacgcagttc
aaggacggttcggaagcggaaatatcggcgacgccggcggccaacacgcagacgatctat
ttgaatgtaagccgtccgcagcttcaggacgtccgagtgaggcaagcgctgtcctgggcg
ctgaatcgggaagagctggtcgtgctggccgccgaagggcagagctttccggtcgcgact
tggctaagctccaatccggcttacgccgaggcccgcagtgcggtgtacgacaagtccgat
ccggagaaggcggcgcagctgctggaagaggcggggtggcagctcggctccgacggcatc
cgctacaaggacggcgagccgctgactgtgcggctgatgacatggggcggagacaaggcg
ttgggagaagcgctgcagaaccagtggacgcaagtcggcattcaggcggaagtgcggcat
ggagattacagcctgatcgagacggcgcgcgagtccggggactgggacgcctcgatcgag
gcgtggagcacgttcggagaggaattcgccctgttgtccgggcagtattcgccgcaggga
agcgccaattatggcggatacgacgataaggagacccaaggtctgctatccggactgtcg
gaggcgtccgacgaggagacgcgccgccaattggcgctgcggatcaacgagcatgtcgcg
cttcaggccccggttgtcagcctgttcccgcgtccgcagattactgccgtcagcaagcgg
ctgcaaggctttgtcccgcatttccggcagttcgagaacgtcgtaaacgccaatctgagc
ctggcagcgaagtag
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