Cohnella sp. LGH: J4772_22895
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Entry
J4772_22895 CDS
T10185
Name
(GenBank) cadherin-like beta sandwich domain-containing protein
Organism
cohl Cohnella sp. LGH
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin-like
SLH
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Beta-prop_TYW4
fn3
Motif
Other DBs
NCBI-ProteinID:
QTH40424
LinkDB
All DBs
Position
complement(5336740..5345472)
Genome browser
AA seq
2910 aa
AA seq
DB search
MGRNYDKNGGTDLVRTRKHWNLGLARLLIAALLWQCLPIFGGVNTVQAAGAGNGDGFVQL
NANPPTAALTDYKWKQVQVNLSPEARQAASMVHDEAAENVILFGGEGVALLNDTWIWDGQ
QQTWQDMLQLTLSPDKRKSAAMAYDPNIGKVLLFGGEGESGVLGDTWLWDGLNARWEQVT
GLADSPSARGGAQMAFDGENLVLFGGYELSGSTKTPLGDMWLWDGAGWTEAHPTVMPPAL
HSGQMVYNGEKALLFGGNEGPTTGTYTSTHAPIITKPVTFDRGSTLLWLWDRVAQSWSSI
DGPAVEDYKGDVYGRWGNAMAYDGRRIVNVGGVTSYINMTNLTVIPELKLPNDIGMTAEA
VDGWAGEDTWEYLSSGFSTDRIYQRDWREIGGNIYPVRGVDNQREPFPISYANMAFDGQN
LVYFGGHRDAIKIYDNYNDNNLVGNMPAGTINETWLFGVPQPSAPGVRLAGDPVVSVDEN
NHANDVVSVVTSVYDNGTKDITARGIEYRAYSQEGNGAWTDVPYTGSASAPGSFTVQLTG
LEWMQQYEVRGYAVNELGKSYTEIKRFRMESGNVEATDLQFNRVGAAVLHVKDKKRLVAV
GTGISNLLSKSPDSIHYFLKDSDGAQYPLNYSIINDRQLGLTWEADLPPGQYDVHLEHDF
FNDRVFDDGLLLTESGFYKPRNFASIEVASTSSSNEANSLKLKGIFTEDPSVPNVYVLND
ATEPVVINDSLLFKGASLVVDKSGATTTISGDGRLYVNSNNALGSVSYTLYEGPFTIASD
HFSIGLTTTEAEDYLNLDIPVKANQLTFTISGFRLNAELHLVLPLGDQEIDEWVTTDELT
FSSGRFELYKSIAVDTGLKAGPLDVDGFKAVVNSIDSVPYVRFEETGTLPGTSLRFNLYT
LTKQGRLDSIKYNTWTSERLGMTGLKVDPLSGSVDNLANKTQIPQTLRVTGSMNDASSSQ
LQKGNAQYHLNNSEFNATLFPYGLTTNNGTANYYWLPVSNMTLQAVTDAKTAAVKGFSNP
GYTMKGDFNLDGKIIGPISMANLSGFKGSITATVRVPAGVPRIGGATVKDVILNVSQGGL
YGTFKHNGIGASLGYSVKDNTMSFDVEAEPPKPTWPTWSLRGAIGGGIASVFDATAPWLD
IVTGVLGFSKSSKDNPVHILSAAPLPRAFDLTTIGASIQPEKPVHIDAQARMTAGQLTTL
DQTPYAVTATEASAGKLSISLSVDHPYTALIALTGDQRAAVLKATAAGATKEQTVQAETT
YDADSDTTYMRVALYAGEWNLTTSGSSAVQVNELQFANKSLQLNELGKLWTEAAERSVTS
FTVDKPGSYILQIGQTPTDPIVNKPDGRPYSLQTAQSEPNWNSFRAADGTMYVLLDAAQA
GTWMISGGTSPSVTLSNAPSGTGMSDVAEWAQNQAYPTVFELNQTEHGQAIVEIYGANAQ
TKLYAPDGERYALQSDPGVPGMNVLYDESQQKQTIWLDGVNLKGQWKVVSDSFTNVVAYK
ASKPFLSIKPLRIEGLVSKYFMLEEQGDYMLTVNGGNENTILIAPDGEPYTLNFAEPDGN
AYLQPASDRVWSAAPSGDSPQIVTSNPVNDGKDMLYVSLLNAPSGKWTVQTAKAVDLQIQ
KLLPLPALTASVSNVAGASNRIQVAWSAENAASDTQVTLMLTGSADQWGGEVIRSGLPAS
GNQAIDLPGDLLPGTYHLSVLGESTNEMPLLAMAEGSVEVTAPTALEAPEQPQVVATGNG
EITLQFASISGDVSAYRIWASKHGGAPAMVPVMDAEPQAGNIQKVIISDLTVGATYDIAV
SAIGYKQDCIVLSPLSASVQTELPAPEPATLAVTVDTAGGKAVVEKSYMAYYGSEEQVGF
TAAEQVSLQIQSDQAAALTLLVNGKRLESKPVAANGTATFDLQALLGVSELQERVYSVRI
EAVNERGDLSITSRKLVIDRTAPLLIASGGLDAQNEPISLNGRVTEHSNVYMTGQTDAGA
TLVVNGITVPVDDNGQFSYYAPIEWGDPEESVVFVMTASDMAGNETVYKFEVMRGVSGPI
PPTPSDLASLAVGNARMITPYQFGQTEYEAAAYADSIRVYAVPMDAASTVTVNDTTLPAS
GYVDIALPASGETTVSIKVHSASAGDKLYSLKLNGTGSSEATLSTLTLNNAQTGDEIPAP
SFTGAEESYTAYVGNGVDLVTVTAGASKIGSAIQVKSQAVSSGQASAPIQLSVGENRIPI
IVTAPDGVTEREYTLVVMREPSDNARLQSLGIVTDGAELLADFNPQTSNYKVLVPDATDE
FKLLPIAEQEGAVLRINGLTATSGVVSVPFTKDAQTVAIEVTAEDEATTRAYTVGLLRRQ
TAPGQSPTLASLEATPNLDGEFSPYKFKYDTVSQTRNAKVSIIAMASDPDAIVTVQDVTQ
QGGGTFTPSVAVGENTIIVNVESADRRTSQTYSVHVTRTSSGSSSSSSSSSPATTTGNVR
QSTVTGGAGDWVVQISIIRTVAADGSTTDTVKLDADKAKDVVAKAKQGKTTVARIQVTDL
PGDPADERYVSLSAQALTLLSDSGLSLQIELPEGVIELRSDALKQLGQKRTDAYFRIVPI
VAASERKTVDTRVLEADLVVQAADGRLVSVIGYPVKIETNYSGSKTEVLLRLDSVKLPLD
KEAAKKLLSELRVYIEHSDGEKKLMQGEVRYNADGSVAGIAVEVDKFSTFTIVRIGLSEG
ETAGTLEPYLSGYPDGTFRPSQSIKRAEFATILHRLGLKSADASAAGRAAGYEDVAAKHW
AAEAIADMQSSGLMLGDNQGRFRPGAAVTRAEMASIVARLIPAGAGDQTATAALPDDVQG
HWAAEAIGKALQAGILQGYPDGSFHPDRPLTRAETVRVLNRLLDRPTPAVSASSWPDVPT
SHWAIRDIESASGIVTVSEGKDGQLVPKRK
NT seq
8733 nt
NT seq
+upstream
nt +downstream
nt
atgggacggaattacgataagaacggaggaacagatttggtgcgcacacgcaagcattgg
aatttgggattggccagattgttgattgccgcgttgttatggcagtgtctgcctatcttc
ggaggggtgaatacggttcaggctgcaggagccggcaacggggacggcttcgtgcaattg
aacgctaatccgccgactgcagctcttacggattataaatggaagcaagttcaggttaat
ctctctccggaggccagacaagcggcatcgatggttcatgacgaagcggctgaaaatgtg
attttgttcggaggagaaggtgtcgcactgctgaacgatacgtggatttgggacggtcag
cagcaaacctggcaggatatgctgcagctcacgctctctcccgacaagcgcaaatcggca
gcgatggcctatgacccgaacatcggaaaagtccttcttttcgggggcgaaggagagtcc
ggcgtgctgggcgatacatggctgtgggacggtctcaatgccagatgggagcaggttacg
gggcttgccgactctccatccgcccgaggcggcgctcagatggcgtttgacggcgaaaat
ctggttctgttcggcggctatgaacttagcggaagtacgaagacgccgttaggcgatatg
tggctgtgggacggagcgggttggacggaagctcatccgactgttatgcctccggctctc
cacagcgggcagatggtttataatggtgaaaaagcactgctttttggcggaaatgagggg
cctacgacaggtacctatacgagtacacatgcaccaataataacaaagccggttacgttt
gatcgaggttctactttattgtggctgtgggatcgcgttgcgcaatcatggagttcgatc
gacggaccggcggttgaagattataagggggatgtttacggtcgctggggcaatgcgatg
gcgtatgacgggcggcgaatcgtaaatgttggcggagtaaccagctacatcaacatgacc
aatttaaccgtaattccagaattgaaattgcctaatgatataggcatgactgcggaggct
gtagatggttgggcaggagaagatacttgggaatatctttcaagcggattttccacagat
agaatatatcagcgcgattggagagaaataggcgggaatatatatcctgttagaggggtc
gacaatcaacgggaacctttccccatcagctatgcgaacatggctttcgatggtcaaaac
ctggtctatttcggcggtcatcgggatgcaataaagatttatgataattacaatgataat
aacctggtcggcaacatgcccgcgggcacaataaatgaaacctggctgttcggcgtgccg
cagccgtcggcgccgggggtcagacttgcaggggacccggtcgtcagcgtggatgagaat
aatcatgcgaatgatgtcgtcagcgtggtgaccagcgtctatgataatggaacgaaggat
attaccgcacgcggaatcgaatatcgcgcctactcgcaagagggcaacggagcttggacg
gatgttccttataccggctctgcctctgctccaggctccttcacggttcagttaacgggg
ctggagtggatgcagcaatacgaggttcggggctatgccgttaatgagcttggcaagagc
tatacggagatcaagcgtttcaggatggagagcgggaatgtagaggcgacggatctccaa
ttcaaccgcgtaggcgctgcggtgcttcatgtcaaagacaagaagcggttggtcgctgta
ggaacggggattagcaacctgctgagcaaatcgcccgacagcattcattatttcctgaag
gattcggacggcgcacaatatccgctcaattatagtattattaacgatcgtcaactgggg
ttgacatgggaagccgacctgccgcccggtcaatatgacgtacatctggagcatgatttc
tttaacgatcgtgtattcgacgatgggctgctgctcactgaatcgggcttttacaagccg
cgcaacttcgccagcatcgaagtcgccagcacatcgagcagcaatgaggccaacagtctt
aaattgaaaggcatattcacggaggacccgtcagtaccgaatgtgtatgtcttgaatgac
gcaaccgaaccggttgttatcaatgattcgttgctgttcaagggcgcgagtctggtggtg
gacaagagcggcgcaacaacgacgattagcggcgatggtcgcctatacgtcaatagcaat
aacgcgctggggtccgtctcctatacgctttatgaaggaccgtttacaattgcgtctgac
catttttcaattggcttgacgaccacggaagcggaagattatttgaatctggacattccc
gtcaaggccaaccagcttacttttacaatatccgggtttcgtttaaatgcggagcttcac
ctcgttctgccattaggggatcaagagattgatgaatgggtaacgacggatgagctgacg
ttcagtagcggccggtttgaattgtacaagagcattgccgtagataccggtcttaaagca
ggcccgctcgatgtggatggttttaaagcggttgtgaacagcattgacagcgttccatat
gtcaggtttgaggaaacgggcacattgcctgggacgagcctccgctttaatctgtatacg
ctgaccaagcagggacgtctcgacagcatcaaatacaacacgtggacgtcggagagactt
ggcatgacaggattaaaggtcgatccactatccggcagcgtggataatctggcgaacaaa
acacagattccccaaactctgcgcgttaccggctcgatgaacgacgcgagttcttcgcag
ttgcagaagggcaatgcccagtatcatttgaacaatagcgaatttaatgccactctgttt
ccttatggtttaactacgaataacggaacggccaactactattggctgcctgtgtcgaat
atgaccctgcaagctgtcacagatgccaaaacggcagctgttaagggtttttccaacccg
ggttatacgatgaagggcgatttcaatctcgatggcaaaataataggcccgatcagcatg
gccaatctgtcaggatttaaaggttcgatcaccgcaaccgttcgcgttccggcaggggtt
ccgcgcatcggcggagcgacggtcaaagacgtgatcttaaatgtgagtcaaggcgggctt
tacggtacgtttaagcacaatggcataggcgcgagtctagggtactcggtgaaggacaac
acgatgtcgtttgacgtagaggcggagccgccgaagcctacgtggcctacgtggagtctt
agaggcgcgattggcggcggtattgccagcgtattcgatgcaacggcgccgtggctcgac
attgtaaccggcgtgctcggattttcgaagtcgagcaaagacaatccggtgcatatttta
tcagcggctccgcttccgcgcgcctttgatttgacgacgatcggcgcgtcgatccagccg
gagaagccggtgcatatcgatgcgcaagcgcgtatgacggcgggacagttgacgacattg
gatcagacgccgtatgctgtgacggcaacggaagcttcggcaggcaagctatcgatttct
ttgagcgtagatcatccgtataccgcgctgattgcgttaaccggggatcaacgagccgcg
gtgctgaaagcgacggctgcgggtgcaacgaaggagcagaccgtacaagcggagacgact
tatgatgcggacagcgatacgacctatatgcgcgtagcgttgtacgcaggagaatggaat
ttgactacaagcggcagcagtgcggttcaagtgaatgaactgcagttcgccaataaatcg
ctgcagttgaatgaactcggcaagctgtggacggaagcggcggagcgttcggtgacctct
ttcacggtggacaagccgggcagctacattctgcaaatcgggcaaacgccaaccgatccg
attgtgaacaagccggatgggcggccttacagcttgcaaacggcacaaagcgaaccgaat
tggaactcgttccgtgctgcggatggaacgatgtacgtcttgttagatgcggcgcaggcg
ggcacatggatgattagcggaggtacaagtccgtccgtaaccttgagcaacgcgccgtcc
ggaacggggatgagcgatgttgcggaatgggcgcaaaatcaagcttatccgacggtattc
gagttgaatcagaccgagcacggtcaagcgattgtggaaatttacggagccaatgcgcag
acgaagctgtatgcacctgacggcgagcggtatgcgctgcagtccgaccccggtgtgccg
gggatgaatgtgctgtatgacgagtctcagcagaagcaaacgatttggctggacggcgtt
aatctgaagggacagtggaaggtcgtaagcgacagcttcacgaacgtcgttgcttataag
gcgtccaagccgttcttgtcgatcaaaccgttgaggattgaagggcttgtcagcaaatac
tttatgctggaagaacaaggggattacatgctgacggtgaacggcggcaacgagaacacc
attctgatcgcgcctgatggcgagccgtatacactgaactttgccgaacctgacggcaat
gcttatttgcagccggcatccgaccgcgtatggagcgcggccccaagcggagattcgccg
cagattgtcacgtcgaacccggtcaatgacggcaaggatatgctttacgtatcgctgctc
aatgccccgtcaggcaagtggacggttcaaacggcaaaagcggtcgatctgcaaattcag
aagttacttccgttgccggcattgacagcttcagtatcgaacgtcgccggtgcaagcaat
cggattcaggtcgcatggtctgcggaaaatgcggcgtccgatacgcaagtaacgctaatg
ctcacaggcagcgctgatcaatggggtggagaagtgatccgcagcggtctgccggcttcc
ggaaatcaggcgatcgatcttccgggagatctgctgcccggcacttatcatctgagtgtc
ttaggcgaaagcacgaatgaaatgccgctgctggcgatggcggaggggagcgtcgaagtg
accgcgcctactgcgcttgaagcgccggagcagccgcaggtcgttgcgacaggcaacgga
gaaatcacgctgcagtttgcctctatctccggggatgtgtccgcttatcggatctgggcg
agcaagcatggcggcgctcctgcgatggttccggtgatggatgccgagccgcaagcgggt
aatatacaaaaggtgatcatttccgatctgactgtcggtgcgacttacgatattgcggtc
tcagctatcggatataagcaagattgcatcgtgctcagcccgctgtctgcgagcgtgcag
acggagctgcctgccccggagccggcaacattagccgtaactgtggacacggccggtggg
aaggcagttgttgagaaatcctatatggcttattacggcagcgaggagcaagtagggttt
actgcggccgagcaggtttccttgcagattcaatccgatcaagcggctgcgcttactctg
ttggttaacggaaagcggctggagagcaagccggtagcggcgaatggaacggcaacgttt
gatttgcaggcgctgcttggcgtgagtgaactgcaagagagggtatacagtgtacggatt
gaagccgttaatgaacgcggcgacctcagcataacctcacgtaagctggtcattgatcgg
acggcgccgctgctgatcgcttccggaggcctggatgcgcagaacgagccgatatcgctt
aatggcagggttacggaacacagcaatgtgtatatgaccggccaaaccgatgcgggagca
acgcttgttgtgaacggcattactgtgcctgtggacgataacggtcaattcagttattac
gctccgatcgagtggggagatccggaagaatctgtcgtattcgtaatgaccgcttcggat
atggcgggcaacgaaacggtatacaagtttgaagtaatgcggggcgtgtctggaccgatt
ccgccaacgcctagcgatctggcatcgctggccgtaggcaacgcacggatgattacgcct
tatcaattcggtcaaaccgaatatgaagcggcagcctatgcggacagcattcgcgtgtat
gcggtgccgatggatgctgcttctacagtgacggtcaatgatacgacacttccggccagc
ggatatgtggacatagcgttgcctgcttccggggaaacaacggtgtccatcaaagtacat
tccgcaagtgcgggagacaagctctattcgctgaagctgaatggaacgggctccagcgaa
gcgacactgagtacgttaacgcttaacaatgcgcagaccggagacgagattccggcgcca
agcttcacaggagcggaggagagctataccgcctatgtgggcaacggcgtggatcttgtg
acggtgaccgctggcgcatcgaagatcggctccgccattcaagtgaaaagtcaggctgtc
tcaagcgggcaagcctctgcgccgattcagttaagcgttggcgagaatcggataccgatt
atcgttactgcgccggatggtgtgactgagcgagagtatacccttgtagtgatgcgcgag
ccaagcgacaatgcgcggctgcaaagcctggggattgtcacagacggggcggagctgtta
gcggacttcaatcctcaaacgagcaattataaagtattagtgcctgatgcgacggatgag
tttaagcttttgcctattgccgagcaggagggtgcagttcttcgtatcaacggtctgacg
gcaacgagcggagtggtgtctgtaccgtttacgaaggatgcgcaaaccgttgccattgaa
gtaaccgcggaggatgaagccacgacgcgcgcctacacggttggcttattgcgccgacag
acggcgcctggacagtcgccaacgcttgccagtctggaagcaacgccaaacctggatggc
gagttctcgccgtacaagtttaagtacgatacggtatcccaaacccggaatgcgaaggtg
agcatcattgccatggcaagcgatccggatgcaatcgtaacggtgcaagatgttacgcaa
caaggcggcggcacatttacgccttctgtcgcggtcggggaaaacacgattatcgtaaat
gtggagtcggcggatcgtaggacctcacaaacctattctgtccatgtaacgcgaacaagc
tcaggttcctcttcgtcctcgtcttcgtcatcgccggcgacaacaacagggaatgttcgt
caatcgacggttaccggcggcgcgggagattgggttgtgcaaatatcgatcattcggacc
gttgctgccgacggcagcacaaccgatacggtgaagctggatgcggataaggcgaaagac
gttgtcgccaaggcgaagcagggcaagacaaccgtcgcgcggattcaagtaacggatctg
ccgggcgatcctgccgatgagcgctacgtgagcttaagcgctcaagcgctaacacttctc
tcggatagcggcttgtcgctgcagatcgaactgccggaaggcgtcatcgagctgcggagc
gatgcgctgaagcagcttggccagaagaggacggacgcctacttccgcatcgtaccgatc
gttgcggccagcgagcgaaagacggtagacactcgggtgctggaggcggacctagtcgtg
caagcggccgacggccgcctggtctccgtgatcggatacccggtcaaaatcgaaacgaac
tattccggctctaagacggaagtgctgctgcgtctcgacagcgtaaagctgcccttggat
aaggaggcagccaaaaagctgctgtcggagctgagagtgtacattgagcatagcgacgga
gagaagaagctgatgcagggagaggttagatacaacgcggatggcagcgtagccggcatt
gccgtcgaagtcgacaagttcagtacgtttacgattgtacgaatcggcttgagcgaggga
gaaacggcaggaacgctggaaccgtatctgtccgggtatccggacggaacattccgccct
tcgcaatcgattaaacgcgcggagttcgctaccattctgcatcgtcttggcttaaagagc
gcggatgcttccgctgccggacgggctgcaggctatgaggatgtggcggccaagcattgg
gctgcagaggcgattgccgatatgcaaagctcgggcttgatgcttggagataatcaaggt
cgtttccgtccgggggctgcggtaactcgtgcggaaatggcaagcatcgtggccagactg
attccggcgggagctggggatcagacagcgaccgcggcgctcccggacgacgtacaaggg
cactgggctgcggaggccatcggcaaagcactgcaagcgggcattctgcaaggttatccg
gacggctcgttccatccggatcgtccgttgactcgagcagagacggtgcgggtgctgaat
cgactgcttgatcgtccgacgcccgccgtctcggcctcttcctggccggacgttcctacg
agccactgggcgattcgcgacatcgaatcggcgtccggcatcgtaacggtgtcggaaggc
aaagatgggcagctcgttccaaagcgcaaataa
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