Cohnella sp. LGH: J4772_22905
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Entry
J4772_22905 CDS
T10185
Name
(GenBank) S-layer homology domain-containing protein
Organism
cohl Cohnella sp. LGH
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
SLH
TEN_NHL
SBBP
fn3
SGL
Mala_s_1-like
Ig_DSCAM-DSCAML_C
DUF6242
TQ
DUF4959
Motif
Other DBs
NCBI-ProteinID:
QTH40426
LinkDB
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Position
complement(5346895..5350617)
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AA seq
1240 aa
AA seq
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MARNRLKYAKALLYKVWIGIIAAMLALPQASSASALSRNWTAYGKSGAVSGSLLGAFDTP
SGVAVDSAGNLYVADTGNHRIQKRDAVTGSWSALNTNTGGPGSGAGEFNGPRAVAVDGSG
NVYVADTENSRIQVLDVSAGTPGTWATIGDPAQFKKPKGIAVDAAGNVYVADTDNNRVRK
LDKATETWTDYTGFKFPRGVAVDGSGNVYVADSGANYRIQKLDVTPGASGNWETLTQGGG
NNPGQVSSPSSLAIDRGGNLYVADTRNHRVQKRDAETGVWSDWKKYDGFSGNGLGEFTDP
FGIAVDGHGDLYVADTGNHRIQQLDGATGSWNEWGQTGIVEGHGLGEFSAPVGIAIDSRD
NLYVSDYGNNRVQKLDASSGLWSEWGSGDGQAGSALGEFENPSGIAVGDDDSVYVADRDN
HRIQVRDANGWSELGQRGSQPGQFEFPSDVAVDREGNIYVADINNFRIQKRAVDTGLWEV
LGNGRGTAVGQFEYASSVAVDSAGNVYVADTDNGRVQKLNVSGEWEEIGFGQGAGLGQFY
EPYDVAVDHEDNVYVADLANNRIQMLDSSTGVWREWGKSGNQAGNVPGEFYSPTGVAIDG
NGDIFVADFGNHRIQKWEFAKPDAPEGVVASSGNGEADVSFIAPEYDGGAPISGYTVTAY
PGGLTASGPSSPIKVTGLTNGTEYTFTVVAVNTKGESIASSASNAVTPMTVPDAPTNIQA
TAGNGEATVSFAVPASNGGGAIAGYTVTAYPGGATASGPGSPIKVTGLTNGMAYTFRVVA
VNDVGTGESSAESNAVTPQARSSGGGGGGGSPSPETITIDVQDGAGDKNGIVSRATIRRT
TDAGGRKLDELTLTAEQAVQAIEQLNKAASHTARIVVPDAKDEVAELLAKLPKAAVAALA
DGKVDLELITNGVRILIPYNSLQGSSEDVYFRLVPVKSEAGRKAVEQQAAAEQIVSDKLI
KTSLVVQGRPMEIETNLSSRPVTLTLPLEQKTTAEQAANLYIFIQHSDGTKELIQGELVS
YDASGKQGLRFTIKHFSTFTVLEGQPAKQAAMSKAYMKGFKDGTFRPDRQLTRAEMAMIL
YNLSGTNGQEQSASYSDVSAKHWAVAAIGYATLDGLMKGAADGKFYPERPITRAEMAVIA
LRLRAATTTETAAFAFSDTAGHWAESSISKAQAAGYMNGYKDGAFRPEQPLTRAEAVAIL
NRVLERKPLTAGEGKWSDVPTGYWAFEAIQAATVDYPVKK
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atggctaggaacagactgaagtatgcaaaagctcttttatacaaagtgtggatagggatc
atcgctgcgatgctggctttgcctcaggcgtcgtcggcctccgcgctttcgcgaaactgg
acggcctatggcaagtccggcgccgtaagcggttctttgctcggggctttcgatactcct
tcgggagtagcggtcgatagtgccgggaacctctacgtggcggatacgggcaatcaccgg
attcagaaacgggacgccgttaccgggagctggagcgcgttgaatacgaatacgggaggg
ccgggaagcggggcgggggagtttaacggtccgcgagccgtagcggtggacggaagcggc
aacgtctacgtcgcggatacggagaacagccggattcaagtgctggacgtttcggcggga
acgccggggacgtgggcgaccatcggcgatccggcgcagttcaaaaaaccgaaaggcata
gcggtggatgcggcgggcaatgtgtacgtggcggataccgacaataaccgcgttcgtaag
ctggataaggcaactgaaacgtggaccgattacacgggcttcaaatttccgcgaggcgta
gcggtcgacggaagcggcaacgtctatgtggccgactccggcgccaattatcggatacag
aagctggatgtaacccccggagcttcgggcaattgggagacgctgactcaaggcggcggg
aataatccggggcaggtcagttccccgtcctcactcgcgatagatcggggcggcaatctg
tacgttgccgatacgcgtaaccatcgcgtccagaaaagggatgcagaaaccggcgtttgg
agcgattggaaaaaatacgacggcttttcgggcaatgggctcggtgaattcacggacccg
ttcggcatagcggtggacggccatggggatttgtacgtggcggacaccggcaatcaccgg
atccagcagctcgacggggctaccggcagttggaacgaatgggggcagaccggaatcgtc
gaggggcatggtctgggcgaatttagtgctccggtcggcatagcgatagacagtcgagac
aacctgtacgtttcggattacggtaacaaccgcgtccagaagctggacgcgtcctccggg
ctatggagcgaatggggcagcggcgacggccaagcgggcagcgcattgggcgagttcgag
aatccgtcgggtatcgcagtcggagacgatgacagcgtctatgttgcggatcgggataat
catcgtattcaggtaagggatgcgaatggctggagcgagcttggtcaacggggaagccag
cccgggcagttcgaatttccaagcgatgtggcggtcgatcgtgagggcaacatctatgtc
gccgatataaacaacttccgcattcaaaagcgggcggtcgataccggattatgggaagtc
ctcggcaacgggagaggaacggcggtggggcaattcgaatacgcttcgagcgtagcggtc
gacagtgccggcaatgtctatgtggccgataccgacaatggtcgcgttcagaaattgaac
gtctccggagagtgggaggagatcggtttcgggcagggagccggactagggcagttttac
gagccttacgatgtcgctgtggatcatgaggataacgtctatgtcgcggatctggccaac
aatcgcattcaaatgctggatagctcgacaggcgtgtggagagagtggggcaaatccggc
aatcaagcggggaacgtgccgggcgagttctacagtccgaccggcgtggcgattgacggg
aacggagatatttttgtcgccgatttcggcaatcatcggatccagaagtgggagttcgcc
aagcccgatgctccggaaggcgtagtagcatcctcaggaaacggggaggcggacgtcagc
tttatcgcgcccgagtatgacggaggcgcgccgataagcggttatacagtaaccgcttat
cccggcgggttgacggccagcggcccaagcagcccgatcaaggtgacgggattgaccaac
ggtacggagtatacgttcacagtcgtcgctgtcaataccaagggagaatccatcgcttcg
agcgcttccaatgccgttacgccgatgacggttccggatgcgccgacaaatattcaagca
acggcgggcaacggggaagcgacggttagctttgcggtccccgcttccaatggcggagga
gccattgccggctatacggtaactgcctaccccggcggagcgaccgcaagcggtccgggc
agcccgattaaggtaacgggtttgacgaacggcatggcttatacgttcagggtggtcgcc
gttaacgacgttggcaccggcgaatcctctgccgagtcgaacgctgtgacgccgcaggcg
cgttcctccggaggaggcgggggcgggggttctccttcgccggagacgattacgattgac
gtacaggacggagcgggcgacaagaacggcattgtgtcccgggccacgatccgccgcaca
actgatgctggcggacggaagctggacgaactgacgttgacggcggaacaagcggtccag
gcgatcgagcagttgaacaaggccgcttcgcataccgcccgcatcgtcgttccggacgcg
aaggacgaagtggccgaactgctcgcgaagctgccgaaagcagctgtcgcggcgctggcg
gacggcaaagtcgacttggagctgattacgaacggagtccgtatcctcattccttacaat
tcgcttcaagggtcttccgaggatgtgtatttccggctcgtgccggtcaagtcggaagcc
ggacggaaagcggtcgagcagcaagcggctgcggagcaaatcgtcagcgacaagctgatc
aagacgtcgctggttgtccaaggccgtccgatggaaatcgagacgaacctgtccagccgc
ccggtgacgctaaccttgccgctggaacagaaaacaacggcagagcaagcggccaatctc
tatatttttatccagcatagcgacggaacgaaggaactgattcagggcgagctggtgtcc
tacgacgcatccggcaagcaggggcttcgttttacgatcaagcatttcagtacgtttacg
gtgctggaaggccaaccggcgaagcaagcggccatgagcaaggcttatatgaaaggcttc
aaggacggcacgttccgtccggatcggcagttaacccgcgcggaaatggcgatgatcctg
tacaatctgtccggaacgaacgggcaagagcaatccgcttcgtattcggatgtttcggcc
aagcattgggcggttgcggctatcggctatgcgacgctcgacggactgatgaagggcgcc
gcagatggcaagttttatccggagcggccgatcactcgcgcagagatggcggtgatcgcg
ctgcgactgagagccgcgacgacaaccgagactgcggctttcgcattctccgatacggcc
gggcattgggcggaatcttctatctccaaggcgcaagcggcgggttatatgaatgggtac
aaggacggcgcattccgtccggagcagccgctgacccgcgccgaagcggtagcgattttg
aatcgggtgcttgagcgcaaaccgctgacagccggtgaaggcaagtggagcgacgttccg
acgggctattgggcgttcgaggcgattcaggcggccacggttgattatccggtgaaaaag
tag
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integrated database retrieval system
