Cohnella sp. LGH: J4772_23070
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Entry
J4772_23070 CDS
T10185
Name
(GenBank) ABC transporter ATP-binding protein
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
cohl Cohnella sp. LGH
Pathway
cohl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cohl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
J4772_23070
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cohl02000
]
J4772_23070
Transporters [BR:
cohl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
J4772_23070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DUF87
AAA_22
RsgA_GTPase
AAA_18
MMR_HSR1
NB-ARC
AAA_16
AAA_23
TsaE
AAA_29
KAP_NTPase
MobB
Zeta_toxin
AAA_15
nSTAND3
cobW
TRPM_tetra
NACHT
DO-GTPase2
Motif
Other DBs
NCBI-ProteinID:
QTH40457
LinkDB
All DBs
Position
complement(5390804..5392552)
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AA seq
582 aa
AA seq
DB search
MKSQRVLVEYIQGKWPYYLLAIAFMTAGNIIQSFYPRIIGNFADQLKQNGLSESHIIDYG
LLLLGVALAFGVLAGLGQYIVMRLGRMFEFFTRGRLFDHFMTLGEHFYSRNGVGKLLSYV
MNDVTAVREALARGINQSTNSSILIVSTVSMMLLSDIPLYLIAVSVLPLLAIPWIVVVFG
PVIRSRSLSVQEALGKMTESAEEQFGGIRVTKKFAVERIMSERFGAEADRVHDKQLKLVR
VSSLFQALIPFLGTLSLIVAIVFGGYLTIHGRLSLGNFVALTLYIRMMVNPLQQIGGVIN
TMQRSRASLDRINELLSKEGEIQEAEQAQARDLSQAGIRIRHLTFSYPDSEPEALHDLSL
DIKPGTTVGIVGKTGSGKTTLVKLLLRMYDPPKGAIAIGGVDIRDLTLESLRSQIAYVPQ
EGFLFSTTIRDNIAFYRRDSAMNQVEEAAKQAQIYGNIVEFPDRFETNLGERGITLSGGQ
RQRTSLARGLIKHAPIMILDDSVSAVDAVTEQRIVETISSVRQGLTTIVIAHRISALKHA
DEIVVLDEGRIVQRGTHAQLLDQPGLYALLHAIQEEGNRDAE
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
ttgaagtcgcaacgcgtgctcgttgaatatatacaaggaaaatggccgtattatctgctt
gcgattgcatttatgaccgccggcaatattattcagtcgttctatccgcgcattatcggc
aactttgccgaccagttgaagcagaacgggctgtccgaatcgcatattatcgattacggc
ttgctgctgcttggggtagcccttgccttcggcgttctcgccggactcggacaatacatc
gtgatgagactcggacggatgttcgagttttttacgcgcgggcggcttttcgatcatttt
atgacgctgggcgagcatttctactcccggaacggcgtaggcaagctgcttagctacgtg
atgaacgatgtgacggcggttcgcgaggcgcttgccagaggcatcaaccagtcgacgaac
tccagcattttgatcgtctcgacggtatcgatgatgctgcttagcgacattccgctatat
ttgattgcggtcagcgtgctgccgctgcttgccattccctggattgtcgtcgtcttcggt
ccggttattcgctcccgttctctgtccgtgcaggaggcactggggaaaatgacggagtcc
gcggaggagcagttcggcggcatacgggtgaccaaaaagttcgcggtcgaacgcattatg
agcgaacgcttcggcgccgaagccgaccgggttcacgacaagcagcttaagctagtccgc
gtgtcctcgctgtttcaggcgcttattccgtttctcggcactctgtcgctcatagtcgct
atcgttttcggaggctatctgacgatccatggccgcctctcgttaggcaacttcgtcgcg
cttaccctttacattcgtatgatggtcaaccctctgcagcagatcggcggagtgattaat
acgatgcagcgttcgcgggcttcgctagacagaatcaatgagctgctatccaaggaaggg
gaaattcaggaggcggagcaggctcaggcgcgcgatcttagccaggccggtatccgcatc
cgccatctgactttttcttaccccgattccgagcctgaggcgctgcacgatctgagcttg
gatatcaagcccggcacgaccgtcggcattgtagggaagaccggtagcggcaagacgacg
ctggtaaagctgctgctgcggatgtacgatccgccgaagggcgcgattgcgattggcggt
gtcgacattcgggatttgacgctggaaagcttgcgcagtcagatcgcttacgtcccgcag
gagggcttcctgttcagcacgacgattcgcgacaacatcgctttctatcgaagagattcg
gcgatgaaccaggtggaggaggccgccaagcaggcgcaaatctacggcaatatcgtcgag
ttccccgatcgctttgagaccaatctgggagaacggggcattacgctctccggcggccag
cgccagcgcacgagcctggctcgcggcctgatcaagcacgcgccgattatgattctggac
gacagcgtcagcgcggtcgacgccgtaacggagcagcgcatcgtcgagacgatctcgtcc
gtgcgccaaggattgacgacaatcgtgatcgcgcatcgaatcagcgcgcttaagcacgcc
gacgagatcgtcgtgctggacgaggggcggattgtacagcgggggacccacgctcagctt
ctcgaccagccggggctatacgccttgctgcatgccattcaggaggagggaaaccgcgat
gccgaataa
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