Cohnella sp. LGH: J4772_23635
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Entry
J4772_23635 CDS
T10185
Name
(GenBank) chitinase C-terminal domain-containing protein
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
cohl Cohnella sp. LGH
Pathway
cohl00520
Amino sugar and nucleotide sugar metabolism
cohl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cohl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
J4772_23635
Enzymes [BR:
cohl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
J4772_23635
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_18
ChiC
fn3
fn3_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
NDNF
YbbR
Big_7
ChitinaseA_N
RGI_lyase
Y_Y_Y
Big_13
TIM-barrel_EndoS
Motif
Other DBs
NCBI-ProteinID:
QTH40561
LinkDB
All DBs
Position
complement(5554323..5557514)
Genome browser
AA seq
1063 aa
AA seq
DB search
MRSSKWIGMLLSFALVCTLLPGMTFAAATGAPGNPSIKQSNWNNSPNYAIGFDMWWGNNG
TSWKLYENGAVIYTGTLTDNSPNGQSASYSFTNKASGTYVYKIDLINSYGTTTSGNLTYT
VVGGTTDNQPPSVPTGLAASNITQNSLTLSWTASTDNVSVTGYEVYQDTTLLGTTAATTY
NVTGLTPNTSYSFTVKAKDGAGNISAASAALTATTEAPDTTPPSVPTGLAASNITQNSLT
LSWAASTDNVGVTGYEVYQGTTLLDTTAATTYNVTGLTPNTSYSFTVKAKDAAGNISAAS
AAANATTEAPDITPPTVPTGLAASNVAPNSLTLSWTASTDNVGVTGYDVYQGATLIGTSA
TTTYNVTGLTPNTPYAFTVKAKDAAGNVSNASSPLSVMTPIGPVDQAACRPEGLYDSGVA
GIPYCDVYDVNGREKLPNGLERRIIGYFTSWRTGTNGEARYLASDIPWTKLSHINYAFAH
INSNNQVSVGSQSPTNPATGMTWPGVAGAEMDSAYSYQGHFNLLNKFKKQNPGVKALVSV
GGWAETGGYFDDNGQRVSNGGFYTMTTNADGSVNQAGINTFADSAVSFLRQYGFDGVDID
YEYPTTMNNAGNPLDWSFSGARLKGLQASYDALLKTLRTKLDQASAQDGKYYMLTIASPS
SGYLLRGMETFQQLKYLDYVNVMSYDLHGAWNKFVGPNAALFDDGKDGELAGAGVYNMAE
YGGIGYLNTDWAYHYMRGMMQAGRINVGVPYYTRGFKNVTGGTNGLWGTAPSTTCPAGSG
LTACGDGAVGIDNLWHDLDTNGNESPAGSNPMWHAKNLEHGILGSYLGSYGLGSATLTGT
YARHYDATLVAPWLWNNTKKVFLSTEDEESINAKADWAISNGIGGLMIWELAGDYDWDAS
KGEYGVGYTLTNAIHSKFSNTTPYGNTNSATPLPANKLKAKVEFTGFKLGDQNYPINIKM
KVTNNSDMTITGSSVIEFDVPTSVNPLFKSWNGDQVSIVSTGHTGNNIGGLDGDFHRVAV
TLASYKSIAPGASELFDLVYYLPISGPANATITIGGVKYAVVP
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgagatcaagcaaatggattggcatgctattaagttttgcgctcgtttgcacattgctc
cccggaatgactttcgccgcagcgacaggagcgccaggcaaccctagcattaaacagagc
aattggaacaacagtccgaactatgcaatcggctttgacatgtggtggggcaacaacgga
acttcctggaagctgtatgagaacggcgccgttatttacacaggcacgctgaccgacaat
tcgccgaacggtcaatctgcgagttactctttcacgaataaagcgtccggcacttatgtg
tataaaatagatttgatcaactcttacggcacgacgacatcgggcaatttgacgtatacg
gtggtaggcggcacgacggacaaccagcctccgtccgtaccaaccggtctagcggcgtcg
aacattacgcagaattcgctgacgctgtcgtggacagcctcgactgataatgtaagcgtt
accgggtatgaagtgtatcaagacacgacattgctgggcacaacggccgcgacgacgtat
aacgtgacaggattgacgcctaacacgtcttactctttcaccgttaaagcgaaggacgga
gcgggcaacatctcagcggcaagcgcggcgctaaccgcaacgaccgaagcgccggatact
acgccgccgtccgtgccaaccggccttgccgcatcgaacattacgcagaactcgttaacg
ttgtcgtgggctgcctcgacagacaatgttggcgttaccggctatgaggtgtatcaaggc
acgacattgctggacacgacggccgcgacgacgtacaacgtgacaggactgacgcctaat
acgtcttattccttcacggttaaggcgaaggatgcggcgggcaacatctcggcggcaagt
gcggcggcaaacgccacgaccgaagcgccggacattacgcctccaacggtgccaaccggt
cttgcggcgtcgaatgtcgcgccgaattcgctcaccttgtcgtggacggcttcgacagac
aatgtcggcgtcacgggatacgatgtttatcaaggcgcgacattgatcggcacatcggcg
acgacaacgtacaacgtaacaggactgacgccgaatacgccttacgccttcacggttaaa
gccaaggatgcggcaggcaacgtctccaatgcaagcagcccgctgtccgttatgacgcca
atcggtccggtcgatcaagcggcctgtcgtccggaaggcttgtacgattccggcgtcgcg
ggcatcccttactgcgacgtttacgacgtcaatggccgcgagaagctgccgaacggactg
gaacgccgcatcatcggctacttcacgtcctggcgcaccggaacgaacggcgaagcgcgg
tatctcgcatccgacattccgtggaccaagctttcccacatcaactacgcctttgctcat
atcaacagcaacaatcaagtttccgtcggcagtcagtctccgaccaatccggcgaccggc
atgacttggcccggcgttgcaggggcggagatggactctgcttactcctaccagggacat
tttaacttgttgaacaagttcaagaagcaaaatccgggcgtcaaagcgctcgtctcggtc
ggcggctgggcggaaaccggcggttatttcgacgataacggccaacgcgtatccaacggc
gggttctatacaatgacgacaaatgcggacggttcggtcaatcaggcgggcatcaatacg
tttgccgattcggctgtctccttccttcgtcaatacggctttgacggcgtagatatcgac
tacgaatacccgacgacaatgaacaatgccggcaatccgctggattggtccttttccggg
gcgcgtctgaagggactccaggctagctacgacgcgctgttgaaaacattgcgcacgaag
ctggaccaagcgtccgcacaggacggcaaatattacatgctaacgatcgcctcgccttcc
tccggttatttgctgcggggtatggaaacgttccagcagcttaaatatctggattatgtc
aacgtgatgagctacgatttgcacggcgcttggaataaattcgtaggccccaacgccgca
ttgttcgatgacggcaaagacggcgagttggcgggggcaggcgtatataacatggccgaa
tacggcggaatcggctatctgaacacagattgggcatatcactatatgcgcggaatgatg
caagccggacgcattaacgtcggagttccgtactatacccgcggcttcaagaacgtaacg
ggaggtacgaacggcctctggggtacggcgccttcaacgacatgtccggcgggctcgggt
ctgaccgcctgcggtgacggtgcggtcggcatcgacaacctctggcacgatctggatacc
aacggcaacgaatctccggccgggtccaacccgatgtggcatgctaaaaacctggagcac
ggcattctcggctcttatctgggcagctacggactcggttccgccacgctgaccggcact
tatgcgcgccattacgatgcaacgcttgttgcgccgtggttatggaacaacacgaaaaaa
gtgttcctctccaccgaggatgaagaatcgattaacgcgaaggccgattgggcgatcagc
aatggcatcggcggtctgatgatctgggagctggccggcgactacgactgggacgcaagc
aaaggagaatatggcgtaggttatacgctgaccaacgccattcacagcaaattctccaat
acgacgccttacggcaatacgaattccgccacgccgctgcctgcgaacaagctcaaagcg
aaagtggagtttaccggctttaagctgggcgatcagaactatccgatcaacatcaaaatg
aaagtgacgaataacagcgatatgaccattaccggcagctcggttatcgaatttgacgta
ccgacctccgtcaacccgctgttcaagagctggaacggcgatcaggtcagcatcgtctcg
accggtcacaccggcaacaacatcggcggcttggacggcgatttccaccgcgtcgccgta
acgctggcgagctataagtcgatcgccccgggcgcatccgagctattcgatctcgtgtac
tacttgccgatcagcggtccggcgaatgcgacgatcacgatcggcggcgtgaaatacgct
gtcgttccgtaa
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