Cohnella sp. LGH: J4772_24400
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Entry
J4772_24400 CDS
T10185
Name
(GenBank) YjhG/YagF family D-xylonate dehydratase
KO
K22396
xylonate dehydratase [EC:
4.2.1.82
]
Organism
cohl Cohnella sp. LGH
Pathway
cohl00040
Pentose and glucuronate interconversions
cohl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cohl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
J4772_24400
Enzymes [BR:
cohl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.82 xylonate dehydratase
J4772_24400
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GFIT
Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
Motif
Other DBs
NCBI-ProteinID:
QTH46736
LinkDB
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Position
complement(5791490..5793454)
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AA seq
654 aa
AA seq
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MGMDIDSYFDINTHAPGPGGSLPLTPDMLRHSPSGDLFGLTQNVGMGWNPAKLLGKQILI
LGTQGGIREEDGRPVALGYHTGHWEVGILMKAAAEEIATRGGVPFAGFVSDPCDGRSQGT
TGMFDSLPFRNDAAMVLRRLIRSLPQRSAVLGVGTCDKGLPSMMLALAGMSKLPGVIVPG
GVTLPPTHGEDAGKIQTIGARYTNGELSLEEAAELGCRACATPGGGCQFLGTAGTAQVIA
EALGMTVPHAALAPSGQPVWEEMARQSARAALKMAEIGLTSGMIVTDRAIRNAMAVHAAF
GGSTNLLLHVPAIAHAAGLSIPTVADWAAMNRSVPRLVSVLPNGPEHHPTVRAFLAGGVP
EVMLHMRKLGVLDEKSLTVTGNTIGETLDWWESSERRYRMRRHLHENEGIDPDRVIFSPE
RAQQAGLSSTVTFPTGNISPEGSVIKSTAIDPSRVDGDGVYRHVGRAKVFTTERAAIHAI
KNKGIVAGDIMVLIGRGPSGTGMEETYQLTSALKHLPFGKDVSLLTDARFSGVSTGACIG
HIGPEALAGGPVGKLRNGDWIDIRIDLHRLEGHIEMMGCGEEPEDSQAGTKILASRMPHP
DLAKDPELPDDTRLWAALQAASGGTWRGCVYDVDRIVKLLEAGMNTAEGRQIMN
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggggatggacatcgattcttactttgatatcaatacacacgctccggggccaggcggc
tcattgccgcttaccccggatatgctgcgccattcgcctagcggggatctattcggtttg
acgcagaatgtcggcatgggatggaatcccgcgaagcttctagggaagcaaatcctcatc
cttggaactcagggcggaattcgagaggaagacggtcgccccgtcgcgctcgggtatcat
acgggccattgggaagttggaatcttgatgaaagccgcggccgaagaaatcgcgacccgc
ggcggagtgcccttcgcgggcttcgtaagcgatccttgcgatggtcgttctcaagggacg
acaggtatgttcgattcattgccgttccggaatgatgccgcaatggtattaaggcgtctt
attcgttccctgccgcaacgttcggctgttctgggtgtaggaacctgcgacaagggattg
ccgtccatgatgctggctctggcagggatgagcaagcttccaggcgtaatcgttccaggc
ggcgttacccttccgccgacccatggcgaggatgccggcaagattcaaacgattggcgcg
agatatacgaacggtgaactatctctggaggaagcggctgaacttggctgccgcgcttgc
gcaacgccaggcggaggctgtcagtttctggggacggcggggacggcacaggttattgcg
gaggctctcggaatgaccgtacctcatgcggcactggcgccgtcaggacagccggtgtgg
gaggagatggcaagacaatcggcgagagctgcgctcaaaatggcggaaatcggactgacg
tcaggcatgatcgtcacggatcgcgccattcgtaatgcgatggccgttcacgcggccttc
ggcggctctaccaatctgctcctccatgttcctgcgatcgcccatgcggccgggctttcc
atccctacggtcgcggattgggcggccatgaaccgctctgtaccgcgattggttagcgtt
cttcctaatggacccgagcaccacccgaccgtaagagctttccttgccggcggcgtgccc
gaggttatgctgcatatgcgtaagcttggcgtattggatgagaaatcgcttacggtaacg
ggcaatacgatcggcgagacgctggattggtgggaatcgtcggaacgacgttaccgtatg
cgccggcacttgcacgagaacgaaggaattgaccccgatcgcgtgatcttcagtccggaa
cgtgcccaacaagcgggattgagctctacagtgaccttcccgaccggaaatattagtccc
gagggctctgtcattaaatcgaccgctattgatccgtcaagggttgacggcgatggcgtc
tatcgccacgttggcagggcgaaggtgttcacgaccgaacgcgcggcaattcatgcgatt
aagaacaaaggcatcgttgccggagatattatggtactcattggacgcggcccatcgggt
accgggatggaagaaacctatcagctgacttcagcgcttaagcatctgccctttggcaag
gatgtatcgctgcttacggacgctcgcttctcgggagtatcaaccggcgcttgtattggt
catattgggcccgaagccttggctggcggacctgtcggcaagcttcgcaacggcgattgg
atcgatattcgtatcgatttgcatcgcttagaggggcatatcgagatgatgggctgcggc
gaggaaccggaggattcgcaagccggaacgaaaatattagcttccagaatgcctcatccc
gatcttgcgaaagaccctgaacttcccgacgatacgcgactgtgggcagcgctgcaagca
gcgagcggcggcacttggcggggatgcgtctatgacgtagatcggattgtcaagctgctg
gaagccggaatgaacacggcggaaggtcgacagattatgaattga
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