Cohnella sp. LGH: J4772_24985
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Entry
J4772_24985 CDS
T10185
Name
(GenBank) DUF4982 domain-containing protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
cohl Cohnella sp. LGH
Pathway
cohl00052
Galactose metabolism
cohl00511
Other glycan degradation
cohl00600
Sphingolipid metabolism
cohl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cohl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
J4772_24985
09103 Lipid metabolism
00600 Sphingolipid metabolism
J4772_24985
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
J4772_24985
Enzymes [BR:
cohl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
J4772_24985
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Glyco_hydro2_C5
Glyco_hydro_2_N
DUF4982
Glyco_hydro_2
Glyco_hydro_2_N2
PqqD
RRM_PARP14_1
Motif
Other DBs
NCBI-ProteinID:
QTH40796
LinkDB
All DBs
Position
complement(5947207..5949672)
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AA seq
821 aa
AA seq
DB search
MRGIPFIQDWKFMLGEPESPHLLVTDDTSWRTLDLPHDWSVEFPFDQEKGEACTGYLPGG
IGWYRKRFTSTPEMIGSKIIINFDGIYNRASIYCNGQLVRFHPYGYSPCLVDITDCLHAE
GEDNLIAVKVDHSRYADSRWYTGSGIYRKAALHIMPKLHIPVWGTYYTTPVVDDAFAVVR
GVITLRNDEAGLQQAELIGSLFGPDGQLVAKERVSCSLVGNQSEELQMEWKIPNPERWEI
HDGKLYRAIVEVVGDGRTIQTVEDRIGIREFRFDADKGFFFNGRNTLIKGVNLHHDGGLV
GAAVPLDVWRRRLETLKACGCNAIRTAHNPASEDFLDLCDEMGFLVQEEFFDEWDNPKDK
RSNGGEQRVDYITRGHAEYFREYAKQDLQDTVLRDRNHPCIFQWSIGNEIEWTYPKYNEA
TGYFGMNASGNYFWTLPPNSKDKIREIIQGLPRDAYDIDKTARLLTRWTKELDTTRPVTA
NCILPSASYETGYIDELDIAGYSYRRVIYDYGHQHYPDKPILGTENVAQWHEWKAVLERE
HIPGIFLWTGIDHMGEAIQKPWPRKGSNLGLLDFAGFQKPSYHMFKSLWNEEPNVHLVTQ
ALEESLYRLNEAGELVEKVPGGWQERVWFWHDVNSHWNYRDGELVVVEVYSNCEEVSLYL
NDTLLAAKRLEQFEDHIYKWAVPYAAGEMRAVGKRAGESTSASIYTVGPLHTIKLLVDKD
TLQIHPDHVIHVTVQLLDEQGHAITNQNVELAFEVEGECRILGVDNGSPDNVQTYQSTSL
VTEQGRGLLLVQGTKPGELAIKAICTSIQAVSNTCKVKVVE
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaattccttttatacaggactggaagtttatgctgggggagccggagtctccc
catttgctggtaacggatgatacctcatggcgaacactggatctgccccatgattggagt
gtggagttcccgtttgatcaggagaagggggaagcctgcaccggctatctgcccggggga
attggctggtatcgcaagcgcttcacgtccacgcctgagatgatcggaagcaagatcatc
atcaacttcgacggcatctataatcgggcaagcatctattgcaacgggcagcttgtacgg
ttccatccctacggctattcgccatgcctggtggatataacggattgcctgcatgctgag
ggcgaggacaatctcattgcggtgaaggtcgatcattcccgctacgcggacagcagatgg
tatacgggctccggcatttatcgaaaggcagcccttcatattatgcctaagcttcatatc
cccgtgtggggcacctattacacgacgccggtcgtcgatgatgcgtttgctgttgtacgt
ggggtcatcaccttgcggaatgatgaagcgggcctgcagcaagcggaactgatcggcagc
ctcttcggaccggatggtcagcttgtagccaaggagagagtgagctgctctctggtaggt
aatcaatcagaggagcttcagatggaatggaagattccgaatccggagcgatgggaaatt
catgatggcaagctgtaccgcgcaattgttgaggtagtgggagacggacggaccatccag
acggtagaggatcgtataggcatacgagagttccgattcgatgccgacaaaggcttcttt
tttaatggaaggaacacgttaattaaaggggtcaatctgcatcatgatggcgggcttgtt
ggcgcggcggtgcctctggatgtatggagacgcaggctggagacgctgaaggcatgcgga
tgcaatgccatccggacagcccataacccagcctcggaggacttcctggatctatgcgac
gagatgggcttcctggtgcaggaggagttcttcgatgaatgggataatccgaaggataag
cgcagcaacggcggggagcagcgggtggattatattacgcgggggcatgccgaatatttc
cgcgagtatgccaagcaggatctgcaggacacggtgctgcgggaccggaaccatccttgt
attttccaatggagcataggcaatgaaattgaatggacgtatccgaaatataatgaggcg
accggctacttcggcatgaatgcatctggaaattatttctggacacttccgccgaacagc
aaggataaaattcgcgagatcattcaggggctgccaagagacgcctatgacattgacaag
acagcccggctcttgacacgctggaccaaggagctggatacaacgagacccgttacagcg
aattgcattctgcccagcgcaagctacgaaacgggctatatcgacgagctggatattgca
gggtacagctaccgccgggtgatctatgattacggacatcagcattatcccgacaagccg
atactgggaacggagaatgtagcccagtggcatgaatggaaggcggtgctggagagagag
catattccgggcatcttcctctggacaggcatcgatcatatgggcgaagccattcagaag
ccttggccgcggaagggctccaatcttggtctgctggatttcgccgggttccagaagcct
tcctatcatatgttcaagagcttatggaatgaagagccgaatgtccatctcgtcacgcag
gctttggaggaatccttgtatcgcctgaatgaggccggtgagctggtggagaaggtgcct
ggcggctggcaggagagagtgtggttctggcatgacgtaaattcccattggaactatagg
gatggagagctggttgtggtggaggtatattccaattgcgaagaggtttccttgtatttg
aacgacaccttgcttgccgccaaacgcctggagcagttcgaggaccatatctacaaatgg
gcagtgccttatgccgcaggagagatgagagctgtcggcaagcgagccggtgaatcaacc
tctgccagtatttatacggtaggcccccttcataccatcaagctgcttgtggacaaggac
accctccagattcatcccgatcatgtcattcatgtaaccgttcagctattggatgaacag
gggcatgccattacgaaccaaaatgtggagcttgccttcgaggttgagggtgaatgccgc
attcttggggtagacaatggcagccctgacaatgtgcagacttatcagagcacaagcctt
gtgacagagcagggcagaggactgctccttgtacagggcaccaagccaggcgagcttgcg
ataaaggcgatatgcacttctatccaagccgtatccaatacctgtaaggttaaagtcgtc
gaatag
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