Cohnella sp. LGH: J4772_26650
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Entry
J4772_26650 CDS
T10185
Name
(GenBank) extracellular solute-binding protein
KO
K17318
putative aldouronate transport system substrate-binding protein
Organism
cohl Cohnella sp. LGH
Pathway
cohl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cohl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
J4772_26650
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cohl02000
]
J4772_26650
Transporters [BR:
cohl02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative aldouronate transporter
J4772_26650
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
FecR_C
DUF3558
Motif
Other DBs
NCBI-ProteinID:
QTH41107
LinkDB
All DBs
Position
6398115..6399866
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AA seq
583 aa
AA seq
DB search
MIRKKATWLFVSLIMVLVVAGCSGSNGNKGGNNASPSASAGSSASQGTPEASQNTEPVKL
TFYYGNVPLKNEGRQTDEVMQELEKRLGVEIEFINQNADRFKLMMASRELPDIIFSFEED
YKQLIEGDLILPLDDLVQSKGPDIAKNTEALDYYRKYVSADTGKLYLLPMQVGATKEMVA
KVPFTDYGAGYLTRWDYYKELGFPPITSPDDFLDVLKAMQEKHPTTADGKKVYGLSSFVE
KAGWGLYPFYVQMALSQGYMDGPGNYMIDADSNFYNFLAQEDGAFWDSMKFFFKANQMGL
LDPESFIQNLDQYQNKQTNLQVLSGIGAWWQAGANEALATIPDAGFVTIPMENHSIYKTN
VSVIGKAGRAFAIAKNSKNPEKAMEVLNYLYSNEGMNLLTRGIQGKQWDKVDNKPVFLES
FIKARENIEEAEKIGVTKYAYIYGLSDYTVNSDEGVAFDLNSESLIKSIEWKEYQLDYAK
HYGGDYPGDAIEKMAAQGKVDLMVFDTSGSVALGTPPDDIKRIDDSIKDYMWKAMPKVIL
AKSEADYETQKKNVIDELYKMGLDKSKAYWDEMWPQSIARVKK
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgatcagaaaaaaagcaacatggctattcgtttccttgatcatggtactcgtagttgca
ggatgcagcggcagtaacggcaacaaggggggcaacaatgcatcgccaagcgcctccgcc
gggagcagcgcatcacaagggacgccggaagcaagccagaacacagaacctgtgaagctt
actttttattacgggaatgttcctttgaagaacgaggggcgtcagacagacgaagtcatg
caagagttggagaagcggttgggcgtcgaaatcgagtttattaatcagaatgcggacaga
ttcaagctgatgatggcgagccgcgaactgccggacattattttctccttcgaagaagat
tacaagcaattgattgaaggcgatctcattcttccgcttgacgatctggttcagagcaag
ggaccggatatcgcaaaaaatacggaagcgctggattattatcgtaagtacgtaagcgct
gacaccggaaagctgtacctgcttccgatgcaggtaggcgcaacgaaggaaatggttgcc
aaggtgcctttcaccgattacggcgccggttatctgacgaggtgggattattacaaagag
ctaggcttcccaccgattacaagccctgacgattttctcgatgtattgaaagcgatgcag
gagaagcatccaacgacggcagacggtaaaaaagtatacggcttgtcttcattcgtagaa
aaagcgggttggggcttatatccgttctacgttcaaatggctctctctcaaggttacatg
gatggtccgggcaactacatgattgatgccgatagcaacttctataacttcctggctcaa
gaggacggcgctttctgggatagcatgaagtttttcttcaaggcgaatcagatggggctg
ctggatccggaatcgtttattcagaatttggaccaataccagaacaagcagacgaatctg
caagtactatcggggattggagcttggtggcaagcaggcgcgaacgaagcgctcgcgact
atacctgatgccggatttgtcacgattccgatggagaatcactctatttacaaaacaaac
gtatcggtcatcgggaaggccggcagagcgttcgcgattgccaaaaactccaaaaacccg
gagaaagcaatggaggtattgaattatctttacagcaatgaggggatgaacttactaacc
agaggcatccaagggaagcagtgggataaggtagacaataaaccggtatttctggaaagc
ttcatcaaagctcgcgaaaatatcgaagaggcggaaaaaatcggcgttacaaagtatgcg
tatatttacggtttaagcgattataccgtcaattccgacgagggagtggcatttgattta
aactctgaatctctcattaagagtattgagtggaaagaatatcagttggattatgccaag
cattacggcggcgattatccgggagatgccatcgagaaaatggcagcgcaaggcaaagtc
gacttgatggtgttcgatacgtcgggcagtgtggctttaggtacgccgccggatgatatt
aagcggatcgacgattcgattaaagattatatgtggaaagcgatgccgaaagtcattctg
gccaaatccgaagcggattacgagacgcagaagaagaacgtcatcgacgagctttacaag
atgggactcgacaagtccaaagcctattgggatgagatgtggccgcaatcgatcgctcgc
gttaagaaatag
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