Cohnella sp. LGH: J4772_29030
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Entry
J4772_29030 CDS
T10185
Name
(GenBank) extracellular solute-binding protein
KO
K17318
putative aldouronate transport system substrate-binding protein
Organism
cohl Cohnella sp. LGH
Pathway
cohl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cohl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
J4772_29030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cohl02000
]
J4772_29030
Transporters [BR:
cohl02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative aldouronate transporter
J4772_29030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
Phage_TAC_5
Motif
Other DBs
NCBI-ProteinID:
QTH41541
LinkDB
All DBs
Position
complement(7015029..7016804)
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AA seq
591 aa
AA seq
DB search
MGGIKRKRHSALIATLALAVMAGCTNAGENAQPSSSPAAAGASASASQPNQQAEKEPVTL
KLTSDNALFMSTLAPGAQSDPVMEEIRKKTGVTLELDTQTDDKKFNLMLAGGDLPDIIVL
QNSPKYLKQIIEGNQVIPLDDLIAEHGQSILKESPSKIEISKKFFSNGTGKLYAIPGIAS
QKGPQYKYANHTYNIRWDYYKELGFPAVNNLDDFLNLLAEMQQKHPKNEQGQPVYGMAPL
FDWGLVPYEMFDRLFGRINKNNMFVYLEPGTFKPAGGILDPNVAYWDGTKFYRKANEMGL
LDPDSFTQKYENFTEKVKAGRVLLSPWSWAGVDEANAALAQEDPLKGWEPLPVPSGQTVY
LGEFGTNGFSNRLIMISKNSKHPERAMELIDYLQSLEGSRLIQNGIQGKDWDIADGKPQW
KQQTLDARKSDPNFAQTTGIGLYWNLAGFVDNYPDPEYGIPINFTNTADIWKTQMTDLDK
DYSEHYGVSYPGELVEKRVQAGEIKTIYYDMDNELGTDASMPDDIKRIETKVTDYLVRMA
PKLIYAANGEEYDSIQATMMDELKKMDAQRAIDYWMTNMTKASETYAGLQK
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgggcggtatcaaaagaaaaaggcattcggcgttaatcgcgacattggcgctggcggtg
atggcgggttgcacgaacgcgggagagaacgcacagccgtcttcgtctccggctgctgcc
ggggcaagcgcgtccgcttcgcaaccgaaccagcaggcggagaaagagccggtcactcta
aaactgacgagcgacaacgccttgttcatgtcgacgttggctccaggcgcgcagagcgac
ccggtcatggaggaaattcgcaagaagacgggcgttacgctggagctggacacgcagacg
gacgacaagaagttcaacttgatgctcgccggcggagatcttccggatatcatcgtactg
caaaattcgccgaaatacttaaagcagatcatcgagggcaatcaagtcattccgctcgac
gatctgatcgcggagcacgggcaatcgattctgaaggaatcgccttcgaaaatcgagatc
agcaagaagtttttcagcaacggcaccggcaagctgtacgccattcccggcatcgccagc
cagaaaggacctcaatataagtacgcgaaccatacctacaacattcgctgggattattac
aaggagctgggtttcccggccgtgaacaatctcgacgatttcttgaatctgctcgcggag
atgcagcaaaagcatccgaagaacgagcaagggcagccggtgtacggcatggcgccgctg
ttcgattggggactcgttccgtacgagatgttcgaccgcttgttcggccggattaataag
aacaacatgttcgtctatctggagccgggaacgttcaagccggcagggggcatcctggat
ccgaacgtcgcgtattgggacggaacgaagttttaccgcaaggccaacgagatgggcttg
ctcgatcccgactcgttcacgcagaaatacgagaatttcacggagaaggtcaaggccggc
cgggtcctgctgtctccttggagctgggccggcgtggacgaagcgaatgccgctctggcc
caagaagatcctttgaagggctgggagccattgccggtgccgtcgggacagacggtatac
ttgggcgaattcggcacgaacggattttccaatcgcctgatcatgatctcgaaaaacagc
aagcatccggaacgggcgatggagttgatcgattatctgcagtccttggaaggttccagg
ctcattcagaacggcattcagggcaaggactgggatatcgcggacggcaagccgcaatgg
aaacaacagacgctcgacgcgcggaagagcgacccgaatttcgcgcaaacgaccggcatc
ggattgtactggaatctcgccggctttgtcgacaactatccggatccggaatacggcata
ccgattaactttacgaatacggcggacatctggaaaacgcaaatgaccgatctggataaa
gactactccgagcattacggcgtctcttatcctggcgagctcgtagagaagcgcgttcag
gccggcgaaatcaaaacgatctactacgatatggacaacgagctcggaacggatgccagc
atgccggacgacattaagcgaatcgaaaccaaggtgacggattacttggtccgcatggcg
cctaagctgatctatgccgcgaacggagaggaatacgattcgattcaggcgacgatgatg
gacgagctgaagaagatggacgctcaacgggcgatcgattactggatgaccaacatgacg
aaggcatcggaaacgtatgcagggctccaaaaataa
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