Cohnella sp. LGH: J4772_30235
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Entry
J4772_30235 CDS
T10185
Name
(GenBank) efflux RND transporter permease subunit
Organism
cohl Cohnella sp. LGH
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Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
OAD_gamma
Motif
Other DBs
NCBI-ProteinID:
QTH41761
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Position
complement(7318708..7321890)
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AA seq
1060 aa
AA seq
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MKSVIGFSLKNKFALWMITIIVVVAGLYSGMTMKQESLPNLSLPFLSVTTVAPGAAPDTV
VQDVTEPLEKRFQNTEGVKNITSTSMENVSSIFIEYDFGQDMDQAVAQLREAASDVKLPE
GVQAPNISKFSFNSFPVISLSASGQGDLEELTRIVSEEVEPALEGVPGVASVQIAGQFVK
EVSLKFNQAKLAELGLTEDTVKGIVQGSALKAPLGLFQFDQTQKTVVVDGRITTIDDLKK
VAIPVIPSAAGAPGGAGQAVPGGSGASAPGAEGAGGTASGADNAGGAASMPNAGLPTVLL
GDIADIEVMGKAESISRTNGAESIGIQVVKANDANTVEVVNGVKAEADKLKEKFTDLKID
IMLDQGKPIEESVETMLSKALFGALFAVIVILLFLRNIRTTLISIVSIPLSLIIAVLFLK
QFDITLNIMTLGAMTVAIGRVVDDSIVVIENIYRRMSLKGEKLKGSELVKAATMEMFLPI
MSSTIVTIAVFLPLGLVSGMVGQIFLPFALTIVFALLASLLVAITVVPMLAHQMFKKGVK
EGKGHDHEENNGKLAQGYRRLLSSALNHKIITLVISFALLVGSLFLVPLIGASFLPDQED
KYAMVTYSPDPGDRIEDVEQKALVAEKVIMDQSEVTSVQYSVGGENPLQPGPSKSGLFFL
QYKSDTKDFADKKSALIEELRKAVPTGEWAEMDQTGGFGGSQFSLSVFGDSLDQIAPVAN
QIADLMKADNSFEKVKTSLSKTYEQYTFVADQEKLSRYGLVPGQIAMELSPQRVRPVLTQ
IEEDGKRYNVYVAVEQAEYKSVEDILAKKLRSPLGMEVTIGEVATVEEGTSPNSIARQNG
KMVVNVTGNIKESDVAKVSSDLQAKVDKLELPSGIEVQFGGVTEQINETFTQLGLAMVAA
IAIVYLALVLTFGGGLAPFAIMFSLPFAIIGGLVALYLTGETLSVSALMGALMLIGIVVT
NAIVLIDRVIHKEREGMSTREALLEAGGTRLRPILMTALATIGALLPLAFGFESAGIISK
GLGVTVIGGLISSTLLTLLIVPIIYELLMKMRRKSKNANA
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtgttatcggattttctctaaagaacaaatttgcgttatggatgatcacgatc
atcgtcgttgtagcgggtttgtattccgggatgacgatgaagcaggaaagcttgcctaac
ttaagccttccgttccttagcgtgacgacggtggctccgggggcagctccggatacggtc
gtacaagatgttacggaaccgcttgagaaaaggtttcaaaatacggaaggcgtcaaaaac
ataacctcgacatcgatggagaacgtatcgtcgattttcatcgaatacgatttcggtcaa
gatatggatcaagcggtcgcccagttgagggaagcggcatcggacgttaaactgccggaa
ggcgtgcaggcgccgaacatctccaaattctcgttcaactcgttcccggtcatttccttg
agcgcatcgggtcaaggcgatctcgaagagctgacgagaatcgtatcggaggaagtggag
ccggcgctggaaggcgttccgggcgtagcctccgtgcaaatcgccggtcagtttgtgaag
gaagtctcgctaaaattcaatcaggcgaagctcgccgagctgggcttgacggaagatacg
gtcaaagggatcgttcagggctcggctttgaaggctccgctagggctgttccaatttgac
caaacgcagaaaacggttgtcgtggacggccgaattacgacgatcgacgatctgaagaag
gttgcgatcccggttattccttccgcggcaggagcgccgggaggcgctggacaagccgta
ccggggggaagcggcgcatcggctccgggcgcggaaggcgcaggcggcacagcttcgggc
gcggacaatgcgggcggagcggcatcgatgccgaacgcgggattgccgaccgtactgctc
ggagacattgccgatatcgaggttatgggcaaggccgaatccatctcgcgcacgaacggc
gctgagtccatcggtattcaggtcgtaaaggcgaatgacgccaatacggtcgaagtggta
aacggagttaaagcggaagcggataagctgaaagagaaatttacggatcttaaaatcgac
atcatgctggatcaaggcaaaccgatcgaggaatccgtcgagacgatgctcagcaaagcc
ttattcggggcgttgttcgcggtaatcgtaatcctactcttcttgaggaacattcgcacg
acgctgatttcgatcgtgtcgattccgctgtcgcttattatcgcggtattgttcctgaag
cagttcgatattacgttgaacattatgacgctcggagcgatgaccgtcgcgattggccgg
gtcgtcgacgactcgattgtcgttatcgagaatatttaccgtcggatgtcgctcaagggc
gagaagctgaagggcagcgagctggtcaaggcggcgacgatggagatgttccttccgatc
atgtcctcgacgatcgtcacgatcgccgtattcttgccgctcggactggttagcggcatg
gtcggccaaattttccttccgttcgcattaacgattgtgttcgcgctgctggcttcgctg
ctcgtggcgatcacggtcgtgccgatgcttgcgcatcagatgttcaagaaaggcgttaag
gaaggcaaaggccacgaccacgaagaaaataacggtaaactggctcaaggctatcgccgc
ttgctgtcctccgccttgaaccataaaatcattacgctcgtcatttcttttgcgctgctg
gtcggaagtctgttccttgtccctctgatcggcgcgagcttcctgccggatcaggaagac
aagtatgctatggtcacgtacagtccggatccgggagatcggatcgaggatgtagagcag
aaggcgttggtcgccgagaaagtcattatggaccagtcggaagtgaccagcgtgcagtac
tcggtaggcggagaaaatccgctgcagccgggaccgtccaagtccggattgttcttcctg
caatacaaaagcgacacgaaggatttcgcagacaagaagtcggcgcttatcgaggagctg
cgcaaagcggttccgacaggagaatgggccgagatggatcaaaccggaggattcggaggc
agccagttcagcctgagcgtattcggcgattctcttgaccagatcgctccggtggcgaat
cagatcgccgatctgatgaaagccgataattccttcgagaaagtgaaaaccagcctgtcc
aagacttatgagcagtatacgtttgtcgccgatcaggagaagctgagccgctacgggctc
gtacctggccagatcgcgatggagcttagccctcaacgcgttcgtccagtgctgacgcaa
atcgaagaagacggcaaacgctacaacgtctatgttgccgttgagcaagcggaatacaag
agcgtagaagacattctggccaagaagctgcgttcgccgctcggaatggaagtgacgatc
ggggaagtggctacggtcgaagagggcacatcgccgaactcgatagccagacagaatggc
aaaatggtcgttaacgtgaccggcaacattaaggagtcggatgtcgccaaagtctcaagc
gatttgcaggccaaggtcgacaagctggagcttccttccggcattgaggtgcaattcggc
ggcgttaccgagcaaatcaatgaaacgtttacccagctcggcctggctatggttgctgct
atcgccatcgtgtatctggcgcttgtgcttacgttcggaggcggtcttgctccgttcgcg
atcatgttctcgctgccgtttgcgattatcggcggtctggtggcgctgtacctgacaggc
gaaacgctaagcgtatcggcgctgatgggtgccctaatgttgatcggtatcgtcgtcacg
aacgcgattgtattgatcgaccgcgttattcacaaggagcgcgagggaatgtctactcgg
gaagcgctgcttgaagcgggcggaactcgtctgcgtccgattctgatgaccgcgctggcg
acgatcggtgcgctgctgcctctggcgtttggcttcgagagcgctggcatcatttccaaa
gggctcggcgtaacggttatcggcggtctgatcagctctacgctgcttacactgctgatc
gttccgattatttacgagctgctgatgaaaatgagacggaaatcgaaaaacgcaaatgct
taa
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