KEGG   Cohnella sp. LGH: J4772_33305
Entry
J4772_33305       CDS       T10185                                 
Name
(GenBank) DEAD/DEAH box helicase family protein
  KO
K02240  competence protein ComFA
Organism
cohl  Cohnella sp. LGH
Brite
KEGG Orthology (KO) [BR:cohl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cohl02044]
    J4772_33305
Secretion system [BR:cohl02044]
 Type II secretion system
  Competence-related DNA transformation transporter (DNA-T) core components
   J4772_33305
SSDB
Motif
Pfam: Helicase_C DEAD ResIII Cas3-like_C_2 AAA_22 AAA_16 TrwB_AAD_bind
Other DBs
NCBI-ProteinID: QTH42301
LinkDB
Position
complement(8074430..8076475)
AA seq 681 aa
MRVVVYAVRLNSERKVIFSIDWETDRQYWSGRADEVVRLREGLPLGEAEQLCRLLKAEWE
GAAKADRHAERTTGLHGGKEASAKGSVEGRDRDGSWADRLGNAARSAGYSGEIERVALKE
GADSRLNEAAELAAERMAGRSLLREEAQQLLDAAPVGSAGVKPLAALQLAALLGAVQLTA
AVAPDDVAAPAAAGLPGWAERALRRARLLWGRGRRRAPELRCRRCSSARLRRTECAACGR
QACAYCEACLTMGRSRECELLIIGAPISGSAGTESTSPMPISAAKSTSHGAATSTPEIAV
KPAVNSKSAAEAGEVRRYLAQRWGLSPAQSDAAAEALAFLEDPSASRGRSFLLWAVTGAG
KTEMIFPLLDSVLERGGRALVATPRRDVVLELAPRLAKAFPDRRFAVLYGGSPDRWREGE
LTLATTHQLLRFQGAFDLVLIDELDAFPYHNDPMLHYAAGKCGKPEGRTVYLSATPPVAM
QRDVSRGKLSYARVPVRYHRYPLPVPGRLKLPSIRFMLGKQTIPNKLLSPIRRSVARGAQ
VFLFVPYVKQVEPMVRLLRQGAKSLGLTASAISGTSSQDEERGDKVVAFRDSSVQLLVTT
TILERGVTIPRSDVFVIDAHNSLFDASSLVQMAGRAGRSGDDPFGFVYYGAPEWTSSQRS
SVRQIQKMNTAAKRRGYLKEK
NT seq 2046 nt   +upstreamnt  +downstreamnt
atgagagttgtcgtatatgcggtgcggctgaatagcgagcgtaaagtgatattctcgatc
gactgggagacggatcgccagtattggagcggaagagcggatgaagtcgttcgccttcgt
gaagggcttcctctgggagaggcggagcagttgtgccgcttgttgaaggcagagtgggag
ggagcggccaaggcggatagacacgctgagcgaacgacgggtttgcacggcgggaaggaa
gcttccgcgaaaggttcagtagaagggcgagatagggacggcagctgggcggatcggttg
gggaatgcggcgagatccgccggatacagtggagagatagagagggttgcgctgaaggaa
ggggcggattcgcgcctgaacgaagcggcggagttagcggccgagcgcatggccggccgc
tcgctgctccgcgaggaagcgcagcagctattggacgccgcgccggtaggcagcgcgggc
gtcaagccgcttgctgcgctgcagctcgcggcgctgttgggggccgtgcagcttacggct
gccgtggcccccgatgatgttgcagcccccgctgcggcggggctgcctggttgggccgag
cgggcgctgcgccgcgctcggctgttgtgggggcgcggacggcgtcgcgccccggaattg
cgctgccggcgttgcagcagcgctaggctgcggcgcacggagtgcgccgcatgcgggagg
caagcctgcgcgtattgcgaggcatgcctgacgatggggcgcagccgcgaatgcgagctg
ctcattatcggcgcgccgatctcaggctcggcgggcaccgaatccacatccccgatgccc
atatcggccgcaaagtcgacgtctcatggggccgccacttcgacgcccgaaatagccgtc
aaaccggctgtaaattccaaaagcgcggccgaagccggagaagttcgacgctacctcgcc
cagcgctgggggctcagccctgcacaaagcgacgctgcggcagaagcgctcgcttttctg
gaagacccgtcggcttcccgggggcgttcgtttctgctttgggccgtgacgggagcggga
aagaccgagatgattttcccgctgctggattcggttctggagagaggggggcgagcatta
gtggcgacgccaagaagggatgtcgtgctggagttggcgccgaggctggctaaagcgttc
cctgatcgcagatttgctgttttgtatggagggagtccggatcggtggcgggaaggagag
ctgactttggcgacgacccatcagttacttcgttttcaaggggcgtttgatctcgtgctg
attgacgagttggatgcttttccgtaccacaacgatccgatgcttcattacgctgcgggt
aaatgcggcaaaccagaggggcgcacggtatatcttagcgcaacgcctccagttgcgatg
cagcgtgatgtttcgcgtgggaaactgagctatgcgagagttccggttcggtaccatcgt
tatcctttgcctgtacccggtagattaaagctgccttctatccgcttcatgctaggtaag
cagacaatacctaataagctgctgagcccaatacgtcgatccgtcgcccgaggagcgcaa
gtatttctgttcgtgccatacgtgaaacaagtggaaccgatggttcgcttgctccgtcag
ggtgcgaagagtcttggactgactgcttcggcgatctcgggcacgtcttctcaagacgag
gagcggggcgacaaagttgtcgcttttcgggatagctccgtacagcttcttgtgacaacg
acgattttggagcgtggcgttacgatcccgcgtagcgacgtttttgtcattgacgcccat
aactcgctgttcgatgcgtcttcgctcgtccagatggcgggcagggcggggcgctcgggg
gatgatccattcggattcgtctactacggcgctccggagtggacaagctctcagcgaagc
tcggtaagacagatacagaaaatgaataccgctgcaaaacgcagagggtacttaaaagaa
aagtga

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