Cohnella abietis: KCTCHS21_02100
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Entry
KCTCHS21_02100 CDS
T05979
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
cohn
Cohnella abietis
Pathway
cohn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cohn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KCTCHS21_02100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF11
SLH
CarboxypepD_reg
Big_1
NPCBM_assoc
Invasin_D3
CarbopepD_reg_2
SpaA
TRAP_beta
SdrD_B
EMC7_beta-sandw
DUF7382
DUF7152
DUF7507
DUF4352
Motif
Other DBs
NCBI-ProteinID:
BBI30811
UniProt:
A0A3T1CYC8
LinkDB
All DBs
Position
complement(233338..241488)
Genome browser
AA seq
2716 aa
AA seq
DB search
MIRLKKHLSILLSALLVLQLFSSLIGVGSVSASPGTPYIGSQIDFWVTGVNDTPQSKLRD
KQRGNPLAELVLGVETEIVLHAKNKAAAGSGKTAYNVGLELVLPDGIVLASSESPSTLEP
QSDGSTIAFWKDIKDLAGNEEFEFPVKVKVTDNYLKKAPPAAVKYGDSLPIKSSLYASSD
ARQLYYEAIAPTSQVTTNVKVVPFSVRIIHDAKNVKGAGSDLTVPVGGAEWGELPYTVKI
INNTRDITTFSKFTQTVGGALEVYGFAGATTSAQTVSGSDRKIEWTGLSLTAGASKQLTF
KTAYFHKDIVSGVENQGAVITHGTERNISFAYTANVNGVTYTDDALHPVAAKSVSHDIVV
YKSVALPTGKSTIGYGDVLKYTLTVKVNEYESVSNVHVKDTIGDGQTFVKYISTPGTVAS
PTKSGGKTVLDWDLGTLSYSDAAKRQITLEYEVKVDNAWTAAHGEGPIVANDVLVNDVEV
SGETVSSGVVKDSDYTEVYVGTPTINERITMVNGGTIVRGSPVNPQTQSVTVGDNVDFHV
GYDAIGLQAKQHNVRIYDYLPLGTTLVGDPTSYVIDTIVPTYDPVQNLLIWDWAAVNRKI
NEGQLAELFKEIKVLVTDNTSSVKKDKGAKNLVKLSYENSDGIVESKRQEVKLVYEEPEV
IISRSVNKTTNLVGTDEVTITLTLTNTGTTPAYHVKLTETVPTDLTTPQPFGSYTFTAVG
NVLSFAEVPQINPGQSVIVQYKANVINPIGAAREIVLEKAAWTYVGQNDTNIVHRTYNGL
ETTQTKLYAKSPVITKEVVDTSNDKNNLRVGDWVVYKVDVQVPANTIAYAPSVINEIPNN
ETLTNIYKNYDTSTHVGTIPVTATPVAGKVTINVPSPAAGDRYTYYYKTTVNRINPGAQE
DHQSDAWFEWNDDSSLSTPPHHHSISPVAKVTVTVKAPQLEITLSPNAASMKKGDSAKQF
TATVRNKGKNTAYSFTPTAVLPAGFIFGANPNNYNISGQTISFGLVTSLAPNAEIAYTFN
AALDHVEGAGSTKSITGNTGDYYSKDTDGTKYDYTIGTSAITVPSVTITNAITATSSGDL
TKIRPGDTVDYQIIVTVPKGTQAFDLVVKDTLANLGNFDIVNKPQSLAASGNILTATLEN
QDATLNEIVHTFNLQLRAKTDKFLVGDPTVYSTSAIAYWNTSSGVGPVQTAPATTSITVV
QPVLGISAVAIAAPNKIFNNDNKEISVSFRLTNAGTSVAKNASVKVNLPVGVAVKTGTIS
DNGVLNGVGNEITWTGLSGSNQDVTFVVTSTTAVSPGSTLNINATLLSYNSRDAEPTKEY
TPNAQAQQVLTIAPVTATASITSTTNNSVTTVRPGDEVTYKLAINIPINTTTFNTRLDEL
TTLTGLTIISVKPVGGSTITPTAEHIFPLGDLVGALTPIEYEIVAKVRTDQSPNQNPYTA
TYTPILTYDSLKVSGTPKPVTVTALDISVAEPKLSLLLSGTKTQFDEADETITYTLKVTN
GGQSPAFNPALELTLPTGVHFVDVGSEAVVTVIGDGTVPSVHFTWAPGTIAAGAYKELVF
TASPDAATEVKKAFDIDFTLLQYFSLPNSGGKQYASLNSNKLNVTIEGAHLLNTAPDQRV
AAAQDATFEHTLTNTGAGADTFDVSAVFPYSADVYVDGIKVIDNKSAVDALLANIPLPPG
GTSTLKWVIHVPEGTPYDNDNPQLINLEAKGIISLKSTLATDKLYIVGSELDGWTGSQAR
IGWTEPTFAPGDPIKLSATSSNDIQKLKASYVYDGHTVDVLFTLDNPTTYVTDGYKIWSN
VFTRLPDDILNGLGNSNSFQVTFEGLSSTDAVIQTDDWSSASTGANNAFTVRNSLIIKGL
ITDGSTAIGIPEAKVTLYNEDANHLLVATVTADTNGDYNFGQQKAARYSLVVEKEGYASG
QTQFFALASSADTEIVVDVALTAYKLALDANPSTIVGDGHSQSRLTATITDLEGNPVAGL
PVTFTAPPGKGSFPSGATAVTDANGKASVLFQSSQISGILSERFPVTATAFDTSHNKLAQ
ANIIVTFEPASIEGIVTEMVNGVAVPVSGAVVVISKDFDNDGVIDFTGTAVTGADGKYTI
AIPRGNVQYDLVITKPVQVGGHTENIAFQQTVTAGNISGLGNDVFVPNKGATGIILFSLS
GGGAGLLAPALQSKLTVRLLDITSNAQVGASEPLALNGTFSLKNVPQGSYKLELSYELAP
GRSIIVNGTVNGLPTVQVTQGGELNIIQELIDPYGKITDYDTNAPIEGAHVELYYADTPR
NILKGLVPNTPVSLPAIVGFAPNDNASPQDSDAAGDYAFMVYDHTDYYLRVTKPGYHGYI
SPTISVELDIVRHDLTLSRIVSTGPSNGSGGGGTIPLPGQRDLAAHLYSDKASYEEGSEI
TYTVVYTNKTNEIAHGVVVQAEVPLFTSVSDAANGSVNGNLISWKIGDLPAGGKGTIVYK
VKVQATGLLKAEVRVDNTATITSTDNLINVDDDTSKLQVLLFSKRYAEQRHTRYILGYPD
GEFKSQRTITRAEIAAIFARLLDLRSTVTGAKLFPDVEPTFWAGGYIEATVKAGLFSGYE
DKTFRPNNAITRAELSQVISKYLKLTAPAPADLHFTDIGQHWAKNAIEEIYRYHIISGYP
DGTFGPGRKMIRAEAVAMINRLLFRGPLTQTGQTFPDVSPSFWAFGDVEESVKSHSYKRN
SDGSESMTELIPEPIW
NT seq
8151 nt
NT seq
+upstream
nt +downstream
nt
atgattcgtttgaagaagcatttatctattctgctgtcggcactgctcgtactgcagcta
ttcagcagccttattggcgtgggttcggtgtccgcaagtccgggtactccgtatattgga
agccagattgatttctgggttactggcgtcaatgatacgccgcaatctaaactgcgggat
aaacagcggggcaatcctctggccgagctagtgctcggggtagaaactgaaattgtgctg
cacgccaaaaacaaggctgctgccggatcggggaaaaccgcctataatgtaggccttgag
cttgtgctaccggacggcatcgtacttgctagcagcgaaagcccaagcacgttggagcca
cagagcgatgggtcaaccattgcgttctggaaagatattaaagatttagccggcaatgaa
gaattcgaatttccggttaaggtgaaggtaacggataactatctcaaaaaggcgccgcct
gccgctgtaaagtacggcgatagcttgccgatcaagtcaagcctttatgccagcagcgat
gcgcgtcagctctattacgaagctattgcgccaacaagtcaagtgaccactaatgtgaag
gttgtgcctttttcggttcgcattattcatgatgccaaaaacgtcaagggcgctggcagc
gatttaacggttccggtaggaggagctgagtggggggagcttccgtatacagttaagata
atcaacaatacgcgggatattactacttttagtaagtttacgcagactgttggtggcgcg
ttagaagtgtacggatttgctggcgcgacaacaagcgctcagacagttagcggatcggat
cgaaaaattgaatggacaggcttatctttaactgcaggggcaagcaagcaactgacgttt
aagacagcttatttccataaggatattgtgtcaggcgttgaaaatcaaggagccgttatt
acgcatggaacggaacgaaatatctcttttgcttatacggcaaacgttaacggtgtaacg
tatacagatgacgcgctgcatcctgtagcagcgaagtccgtatcgcatgatatagtcgta
tacaaaagcgtagcactacccacaggaaaatccacgatcggttacggcgatgtgttaaag
tacacgcttaccgtaaaggtaaacgagtatgaatccgtatcgaacgtacatgtaaaagat
acgattggcgatgggcagacctttgttaagtatatttcaacgccaggaacggtggcttct
ccaacaaaatcaggcgggaagaccgtgctggattgggatttaggcacgctcagctattct
gacgctgccaagagacagattacactggagtatgaagtaaaggtagacaatgcctggact
gctgcgcacggggaaggcccgattgttgcgaacgatgtgctcgtcaacgatgtagaggtg
agcggtgaaaccgtttcttccggagttgttaaggactccgattacacggaagtgtacgtg
ggaactccaaccataaatgagcgtattaccatggtcaatggcggtactattgtacggggc
agtcctgttaatccgcagactcaatctgtaaccgttggggataacgtcgactttcacgta
ggctatgatgcgattggcttgcaagcgaagcagcataacgtgcgtatttacgattattta
ccgctcggaacgacacttgtgggcgaccctacaagctacgtaatcgatacgattgtacct
acctatgaccctgtgcaaaatttgctaatctgggattgggccgctgtcaatcgtaagatt
aatgaaggtcaattagctgagctatttaaagaaattaaagtgttggtaaccgataataca
agttccgtaaagaaggacaaaggcgccaaaaatttggtgaagctgtcttatgagaattca
gacggcatcgtagagagcaaacgtcaggaagtaaagctggtgtatgaagagcctgaggtt
atcatcagccgttctgtcaacaagacgacaaatttggtaggcactgatgaggtaaccatt
acccttacgttaacgaataccggcaccacaccggcttaccatgttaagctgactgaaacg
gtgccgacggatctgactactccacagcctttcggaagctatacgtttacagcagtgggg
aatgtgctgagtttcgcagaggttccgcagattaatccgggccagagcgtgatcgtacaa
tataaagctaatgtgattaatccgattggcgcagcccgggagattgttcttgagaaagcg
gcatggacttatgtgggccagaatgacacaaacatcgttcaccgtacatacaacgggctt
gaaacaacgcaaacaaagctgtatgcgaaatctccagttattactaaggaggttgtggat
acttccaatgataagaataaccttcgtgtaggcgactgggttgtgtacaaagtcgatgtt
caagtgcctgcaaatacaatcgcgtacgctccatcagttattaatgaaataccgaacaat
gagacattaactaatatttacaaaaattacgatacatctacacatgtaggaactattcct
gtcaccgctacaccagtagctggaaaagtgacgataaacgttccgtcgcctgcagcggga
gatcgttatacgtattactataaaacgacagtgaatcgaattaatcccggtgcacaggaa
gatcatcaatccgatgcctggtttgagtggaatgacgacagttcgctcagtacgccgccg
caccatcattccatttcacctgtagctaaggtgacggtgacggttaaagcgcctcaatta
gagatcactctttcaccgaatgcggcttcaatgaagaaaggcgattcggctaaacaattc
acagctacagtgagaaacaaaggtaaaaatacagcctatagctttacgccgactgctgta
ttgccggctggcttcatatttggcgcgaatccgaacaattacaacatttcgggtcaaaca
ataagctttggactagtaactagcttagctccaaatgccgaaatagcatatacgttcaat
gcggctttagatcatgtggaaggcgccggttcaacgaaatccattacaggtaatacgggt
gattattacagtaaggatacggatggaacgaagtatgactacaccatcggcaccagcgct
ataaccgtgccaagcgtaacgataacgaatgcgatcacagcaacctcaagcggagatctt
accaagattcgtccgggagacaccgttgattaccaaataattgtcacagtaccgaaaggt
actcaagcatttgatttggttgtaaaggatacgctggcgaatttgggcaatttcgatatt
gttaataagccgcaatcgctggcagccagcggcaacattttgaccgcaacacttgagaat
caggatgcaacgctcaatgaaatcgtccatacgtttaatttgcaattgagagcaaagaca
gacaagttcttagtcggcgatccaaccgtgtatagcacgtcggccatcgcgtattggaac
acaagttctggagttgggcccgtgcagacagccccagctactacaagtattactgtagtt
caacctgtgctaggtattagtgccgtagcaatagcggcacctaacaagatttttaataac
gataataaggaaatcagcgtttccttccgattgacgaatgcgggaacgtccgtcgccaaa
aacgcgtccgtgaaagtgaaccttccagtcggagtggcggttaagacaggtactatttcc
gacaacggcgtgctgaatggagttggcaacgagattacttggacgggactgtccggcagc
aatcaagatgtcacgttcgtagtgacgagcacgacggcggtaagcccaggctccaccttg
aacattaacgcgacgctactgtcttacaactcgcgcgacgccgaaccgacgaaggagtat
acaccgaatgcacaggcacagcaggtgctgacgattgcaccggtgacggcaacggcttcg
attacttcaacgacgaacaacagcgtcactacagtgcgtccaggcgacgaagtcacttac
aagctggctatcaatattcctattaatactacgacatttaatactagattagatgagctg
actactttgaccggtctgacaattattagtgtgaagccggttggcggaagtacgataacg
cctactgcagaacatattttcccgctgggcgatttggttggcgctttgactccaattgaa
tatgagatcgtagccaaggtaagaacggatcaaagtccaaatcagaatccttatacggca
acatacacaccgattttaacttacgattccttaaaagtatcaggaacgccaaaaccggtt
accgtcacggcgctggacattagcgtagcggagcctaaattaagcttgcttctgtctgga
acgaaaactcagtttgatgaagcagatgagacaattacttatacgctgaaggtaacgaac
ggcgggcagtctccggcatttaatcctgcattggagttgacgcttccaacaggagtacat
tttgttgatgttggctcagaggctgttgttacggtcattggagatggaacggtgccttcc
gttcatttcacttgggcccctggaacgatagcagcgggagcgtataaagagctggtgttt
actgcatcgcctgatgccgctacggaagtgaaaaaagcgtttgatattgatttcactttg
ctgcaatatttttcattgccgaatagtggaggcaaacaatacgcgtccttgaattctaat
aaattgaatgtgaccattgaaggcgcccacttattgaatactgcgccggatcaacgtgtt
gcggcggcacaggacgcgacattcgagcacacattaacgaatacgggcgcaggtgcggat
acctttgatgtttcagccgtattcccgtactctgccgatgtatatgtcgatggcattaaa
gtcattgacaataaatcagcggttgatgctttattggcgaatattccgctgccaccaggc
ggaacgagcacattaaaatgggtcattcatgttcccgagggaacgccgtacgataatgac
aatcctcaattgatcaatttagaggccaaagggataatcagcctcaaatcgacacttgca
acggataagctatacattgttggtagcgaactggatggatggacaggcagccaagcgcgc
ataggatggacagagccgacttttgcgccgggcgaccctatcaagttgtctgccaccagc
tcaaacgatattcagaagctgaaagctagctatgtatatgacggccataccgttgatgtg
ttgtttacactggacaatccaacgacctatgtgacggatggatataagatatggagcaat
gtgtttacaagattgccggacgatattctcaatggtctaggcaactcgaacagcttccag
gtgacttttgaaggtcttagctctaccgatgcggttattcaaaccgacgattggagctca
gccagcacaggagctaacaacgcttttacagtgagaaacagcttgattattaaaggatta
attacggatggatctacagcaatcggcattcctgaagcgaaggttacgctttataacgag
gatgctaaccatttattagtcgctacggttactgcagataccaacggcgattataacttt
ggccagcaaaaagcggctcgttacagcctcgttgtagagaaagaaggctatgcgagcgga
caaacacaatttttcgcattagcttcgagcgccgacacggaaattgtagttgatgtcgca
ctgacagcttacaaactagcacttgatgccaatccttcgactatcgttggcgatgggcat
tcgcaatcgagattgacagctacgataactgatctggaaggaaatccggttgcagggctg
ccggtaacgttcacggctcctcctggcaaaggctcgttcccatcaggagcaacggcggta
actgacgctaacgggaaagcatccgtgctgttccaatcgtcgcaaatctccggtattttg
tcggaacgcttcccagtaacggcaacagcctttgatacaagccataataaattggcacaa
gccaatattattgtaacttttgagcctgcttctattgaaggaattgtgaccgaaatggtt
aatggcgttgctgttccagtgagcggagcggttgttgtcatatccaaggattttgataat
gacggcgtgatcgattttactggcactgcagtaacaggagcggacggcaaatatacaatt
gcgattccgcgcggcaatgtccaatatgatttggttattacaaaacctgttcaggttgga
ggacataccgaaaatatcgcattccaacagacggtaactgcaggaaacatcagcggacta
ggcaacgatgtgttcgtacctaataaaggcgcaaccggcattattttgttcagcctatcc
ggcggcggagctggccttcttgctcctgcgctgcaatccaagctaacggttcgcttgctg
gatatcactagtaacgcccaggttggcgcttcagagccgcttgcgcttaacggtactttc
agcttgaagaacgtgccacagggaagctataagctggagctgagctatgagcttgcacca
ggacgttctattattgtcaatggaactgtaaatgggctgcctacggtgcaggtaacgcaa
ggcggagaactgaacattatccaagagctcattgacccttacggaaaaattaccgactac
gacacgaacgctccgattgaaggagcgcatgtagaattgtattatgctgatacgccaaga
aacatcttaaaaggccttgttcctaatacgcctgtatcattgcctgccattgtcggtttt
gctccgaatgataatgccagcccacaggattccgatgcggcaggggattatgctttcatg
gtatacgatcataccgattattacttgagagtaacaaaacccggctatcacggatatata
agtcctaccatttcagtagagctagatattgttagacatgatttaacattgagtcgaatt
gtttcaacaggtccatccaatggatctggaggcggtggaacgatcccattgcctggacaa
agagatctggccgctcacctttactcggacaaagcaagctatgaggaaggcagcgaaatt
acttatactgtggtatacaccaataaaacaaacgaaattgcgcatggtgtagtggttcag
gctgaggtgccgctgttcaccagcgtttcggacgcagctaacggatccgttaatggcaat
ctcatcagttggaaaataggcgatcttccggccggaggcaagggcaccatcgtttacaag
gtaaaggtgcaagccacaggcttactgaaagccgaagtacgggtggacaacacagcgact
ataaccagtacggacaatctaattaacgtagacgacgacacatccaagcttcaggtactt
ttattctcgaaacgttacgcggagcagcggcacactcgttatatactcggatatccggac
ggcgagtttaagtcgcagcgcactataacaagagcggaaattgcagctatctttgcccgc
cttttggacttgcgcagcaccgtaacaggcgcgaagctattcccggatgtggagccaact
ttctgggctggcggatatattgaggccacagtgaaggctgggttattcagtggttatgaa
gacaaaacgttccgcccgaataacgccattacccgcgcggagctttcacaagtcatctcc
aagtacttgaagctgactgctcccgctccagctgatctgcactttacggatattgggcag
cactgggcaaaaaatgctatcgaagagatttaccgttatcacatcatttccggttatcca
gacggcactttcggcccaggcagaaaaatgattcgcgccgaggcagttgccatgattaac
cgtctgttattcagaggcccgcttacgcagacaggccaaacgttccctgacgtcagccct
tcattctgggcgtttggcgatgtagaggaaagcgtgaagtcgcatagctataaacggaac
tcggatggttcggaatcgatgacggagctcatccctgagccgatttggtaa
DBGET
integrated database retrieval system
