Cohnella abietis: KCTCHS21_02290
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Entry
KCTCHS21_02290 CDS
T05979
Symbol
btr_1
Name
(GenBank) HTH-type transcriptional activator Btr
KO
K21701
AraC family transcriptional regulator, transcriptional activator for feuABC-ybbA operon
Organism
cohn
Cohnella abietis
Brite
KEGG Orthology (KO) [BR:
cohn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cohn03000
]
KCTCHS21_02290 (btr_1)
Transcription factors [BR:
cohn03000
]
Prokaryotic type
Helix-turn-helix
AraC family
KCTCHS21_02290 (btr_1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Peripla_BP_2
Motif
Other DBs
NCBI-ProteinID:
BBI30830
UniProt:
A0A3T1CYB5
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Position
complement(278967..280526)
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AA seq
519 aa
AA seq
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MKTSHLLRYCGIDSFEVSKNGERVLPASNSHTAILCLGGAGTIGFTKESLNLSPGEAYFL
APGQALTLLADGEPLKGYFIRFEVYSLRVEELHSMKVTEYMDGQIRTGNQKLLAESCDLL
LRLQTEALQDGFSGQAELYRIMSLLAEGRTKSQEEVSTDAAIARVSGFMEQNWERELTRK
ELARLAGFSPGYFSLAFQEHTGVSPLAYLMDIRIKRAKDLLLSGGGVKETAIKVGFNDEF
YFSRRFKQKTGFSPLAFVRSRRRSIASVSDPISGSLMALSLLPKAAAFYPNHEQYSRMIR
LHSDEEGQGAVWDHNLKLLKEAGPELIFCTDILNERARQQLERIAPTVPIPWLSVDWRQQ
LLTIADAADQREEGASWLSEYDRRAETVYRKVRSKIGGATLNIWRIMGSEYRIYGGRNAG
AVLYGDLKLAATHNLDQISVFDTVSKEALIDYDADVLLIMVDSTAQAARERAVLQSSELW
SRLTAVRNGRVYEIETEKLFEYSAWSHDRALSYFMQMFS
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgagtcatttactacgttactgcggcattgattcctttgaagtaagtaagaat
ggcgaaagggtccttcccgcttcaaattcacatactgccatcctgtgtctgggcggcgca
ggaacgatcggctttacgaaagaaagcctgaatctgtctcctggtgaagcctattttttg
gcgcccggacaagcattaacgcttcttgcggatggtgagccattaaagggttattttata
cgttttgaggtttactctcttagagtggaagaacttcattctatgaaagtaacggaatat
atggatggtcagatccggacaggaaaccagaaattgttggctgaatcctgtgaccttctg
cttcgattgcagactgaggcgctgcaagacggtttcagcggacaggcagaattgtaccgc
ataatgtcgttgcttgccgagggtcggacgaaatcgcaggaggaagtatcgaccgatgcc
gctattgcccgcgtgtccggctttatggagcagaattgggaacgcgagctcacgcgcaaa
gagctggctagattggcaggctttagcccaggctatttttcattggcatttcaggaacat
acaggggtttccccgttggcatacttaatggatattcgcataaaacgagcaaaagatctg
ctcctgtcaggcggcggagtaaaagagacggctatcaaggtcggctttaacgatgagttt
tatttcagtcgccgcttcaaacagaaaacgggcttctctcccttggctttcgttagaagc
cgccggcgcagcattgcaagcgtctccgatccgatttccggaagcttgatggcgcttagc
ttattacctaaggccgccgcgttctaccccaatcatgagcagtacagccgcatgattcgg
ttgcattccgatgaggaggggcaaggagcggtatgggatcataatctaaagctgctaaag
gaagctgggccggagcttattttttgcacggacatcctgaacgagcgggcacggcagcag
ttggagcgaattgcacccacggtacctattccctggctgtcggtcgattggcggcagcag
ctgctgacaatcgcggacgcggccgatcagcgtgaagagggggcttcttggttatcggag
tacgatcgtagagctgaaacggtgtatcgcaaagttagaagcaaaatcggtggagccact
ctgaatatatggcggattatgggctcggaatatcggatttacgggggacgtaacgcaggc
gctgttctttatggcgacctgaagctagcggctacgcataaccttgatcagatcagcgtg
ttcgacacagtttccaaggaagcactcatagactatgatgccgatgtcctcctcattatg
gtcgattcgacagcccaggctgcccgagaacgtgctgtccttcaatccagcgaactatgg
agccgattaactgcggtacgcaacggccgtgtatatgaaatagaaacggaaaagctattc
gaatactccgcatggtctcatgacagggctctgtcttattttatgcaaatgttcagctga
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