Cohnella abietis: KCTCHS21_07940
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Entry
KCTCHS21_07940 CDS
T05979
Symbol
yfiC
Name
(GenBank) putative ABC transporter ATP-binding protein YfiC
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
cohn
Cohnella abietis
Pathway
cohn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cohn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
KCTCHS21_07940 (yfiC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cohn02000
]
KCTCHS21_07940 (yfiC)
Transporters [BR:
cohn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
KCTCHS21_07940 (yfiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
SMC_N
AAA_16
AAA_22
AAA
nSTAND3
RsgA_GTPase
AAA_30
ABC_membrane_3
AAA_23
DEAD
TsaE
AAA_15
MMR_HSR1
IstB_IS21
DO-GTPase2
AAA_28
AAA_29
KAP_NTPase
AAA_5
ABC_membrane_2
AAA_18
AAA_24
Motif
Other DBs
NCBI-ProteinID:
BBI31395
UniProt:
A0A3T1D058
LinkDB
All DBs
Position
986918..988750
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AA seq
610 aa
AA seq
DB search
MWEALSEPFRYKKSKAVISLEKTIPTKREKQKAKDWQSTIRRIGKYLSHHKGRLSLVLLM
VLLSSGLTLLGPYLIGRAIDHYLAGPGGTPWVLFLAGLATVYVLSSLIGWLQSIWMITIS
QETVYRMRVELFGHLHRLPIPFFAKRQRGELMSRMTNDMDNVSSTLNSSAIQVFSSVLIL
IGTVTVMLFLSPLLTLLTFLIVPAMVVGMKWITRRTGVLFKERQRNLGELNGYIEETLSG
QRIVKAFSQENRVIGEFRQRNDQIRLSGFWAQTISGFVPKLMNGLNNISFAIIAGVGGIL
AIRGAITVGVIVVFVEYARQFTRPLNDLANQWNTLLSAIAGAERVFEILDEEEEDKDEST
AITLEAIQGEVEFSHVSFSYNKSEQTLKDISFKAQAGETIAIIGPTGAGKTSLIQLLSRF
YEADGGQITIDGHDITSIKRESLRSHMAFVLQDSFLFEGTIRENIRYGKLDATDEQVEEA
ARLANAHSFIVRLPGGYDKILQGDGSGISQGQKQLLAIARAILADPAILVLDEATSSIDT
VTEIKIQEGLQRLMEGRTSFVIAHRLNTIRRADRILVLKDGSLLEAGSHDELVAKGNLYS
ELYYGHGQLL
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgtgggaagctctaagtgagcccttccgctacaagaagtcgaaagcagtgatcagccta
gagaaaacgatccctactaaacgcgagaagcagaaggcgaaagactggcaatcaaccata
cggcgaatagggaaatatctttctcatcacaaaggacggctaagtcttgtgctgcttatg
gtcttgttgagctcagggctaaccttgctcggaccttatttgatcggcagggcgattgat
cattatttggcaggtccgggaggcacaccttgggtgttatttctggcaggacttgcaacc
gtgtatgttctaagctcattaatcggctggttgcagagcatatggatgattactatatct
caggagacagtttataggatgagggtggagctattcggtcatctacaccggttgcccatt
ccgttcttcgccaagcgtcagcgcggagaattgatgagccgtatgaccaatgacatggat
aacgtgagctcaaccttaaatagctctgcgattcaagtgttttctagcgtgctcattctc
attggaacggttacagtaatgctttttcttagtccactgcttaccttgctcacatttttg
atcgttcctgctatggtagtggggatgaagtggattacacgaagaactggcgtattgttt
aaggagcggcagcgcaatttaggggagttgaacggctacattgaagaaacgctctctggt
cagcgtatcgtcaaagccttctcccaagaaaatagagtcattggcgagttccgtcagcgt
aatgatcaaatcaggctttctggcttctgggcacaaacgatatcggggtttgttcctaag
ctgatgaatgggctcaataatataagctttgccatcattgctggtgtgggaggcattctg
gccattcgtggagcgataaccgtaggtgttatcgttgttttcgtcgagtatgctaggcag
tttactcgcccgcttaatgatctagcaaaccagtggaatacgttgctgtcagctattgca
ggagcggagcgggtattcgaaattttagatgaagaagaggaagacaaggatgagagcacg
gcaataacacttgaagccattcagggtgaagtcgagttctctcatgtatcgttttcttac
aataaaagcgaacagacacttaaggatattagcttcaaggcacaggctggtgaaacaata
gccattattggtccgaccggggccggtaaaacatcgctcatccagctgctttctcgcttc
tacgaggcggatggtggacagattactatcgatggtcatgatattacttcaattaaacga
gagagccttcgttctcatatggcttttgttctgcaggattccttcttattcgaggggacg
attcgtgaaaatatacgttatggcaaacttgatgcgacagatgaacaagtggaagaggct
gcgagattagcgaatgcgcattcgttcattgtgcggctaccgggcggctatgacaaaatt
ttgcaaggagacggcagcggcattagccaagggcagaagcagctgcttgcgatagcgagg
gcaattcttgctgatccggctattctcgttctagatgaagcgacgagtagcatagatacc
gttacggaaataaaaattcaagaggggctgcagcggttaatggaagggcgcactagcttt
gtcattgcccatcgcttaaatacaattcgtagggctgatcgtatccttgtccttaaagac
gggagtcttcttgaagcaggctcacatgatgagctggtggctaaaggtaatctttacagc
gagctttattatgggcatggacagcttctgtag
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