Cohnella abietis: KCTCHS21_12160
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Entry
KCTCHS21_12160 CDS
T05979
Symbol
ku
Name
(GenBank) non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
cohn
Cohnella abietis
Pathway
cohn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cohn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
KCTCHS21_12160 (ku)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cohn03400
]
KCTCHS21_12160 (ku)
DNA repair and recombination proteins [BR:
cohn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
KCTCHS21_12160 (ku)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Zn_ribbon_3
CDC24_OB3
Motif
Other DBs
NCBI-ProteinID:
BBI31817
UniProt:
A0A3T1D134
LinkDB
All DBs
Position
complement(1500256..1501143)
Genome browser
AA seq
295 aa
AA seq
DB search
MHTVWKGAISFGLVHVPVKMFTATEDKDIHLRMIHKECGTPIANVRTCPHCEKELGWDDI
SKGYESEKDRFVLFESDELDAIKPENTRTIQILDFVDLTEIDPLYYQKAYYLSPDQAGSG
AYNLLLEAMRQSGKIGIAKIAIRSKSSLAAIRAVDNCICMETMHYPDEIRPLQQVPNLPE
QTSVNERELTMAKMLIDQLSTPFDPAKYTDDYRIALQEAIQRKIAGEGTDIITAPAAERT
NVIDLMAALQASLEATNSKPAKPPTTAATPTDTGEDRSKAKPRGTRGRKKEGAVP
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgcatacggtctggaaaggtgcgatcagcttcggcttggttcatgtacctgtcaaaatg
ttcacagctactgaagacaaagatattcatttacggatgattcacaaagaatgcggtacg
cctatcgccaatgttcgcacctgccctcattgcgagaaggaactgggatgggatgacatc
tcgaagggctacgaaagcgaaaaggatcgtttcgtcttgttcgaatccgatgagcttgac
gctataaagccggaaaatactcgaacgattcaaattttggattttgtcgatttgacggaa
attgatcccttatattatcagaaggcttattatttatctcccgaccaagcaggctcaggt
gcttataatttgttgctcgaggctatgcgtcaatcgggtaaaatcggtatagctaaaatc
gcaatacgaagcaaaagtagcttggccgctattcgggctgtagacaattgtatatgcatg
gaaaccatgcactacccagatgaaatccgccccttacagcaggtaccaaacttacccgag
caaacttccgttaatgaacgggagctaacaatggctaaaatgctcattgatcagctttca
actccctttgatccggccaaatatacggacgattaccgaattgccttgcaagaagctatc
caacgtaaaattgctggtgaaggcacggatattattacggctcctgccgcagaaagaaca
aatgtcatagatcttatggcagctctccaggctagcctagaggctacgaattcaaagcca
gctaagccacctaccactgctgctacgccaaccgacacaggggaagaccgtagcaaagcc
aagcctcgtggcacacgtggtcgcaagaaagagggcgccgttccctaa
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