Cohnella abietis: KCTCHS21_12770
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Entry
KCTCHS21_12770 CDS
T05979
Name
(GenBank) DNA-binding transcriptional regulator KdgR
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
cohn
Cohnella abietis
Brite
KEGG Orthology (KO) [BR:
cohn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cohn03000
]
KCTCHS21_12770
Transcription factors [BR:
cohn03000
]
Prokaryotic type
Helix-turn-helix
IclR family
KCTCHS21_12770
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR
TrmB
MarR_2
Pox_P4B
HVO_A0261_N
Rrf2
WH_Halo
Motif
Other DBs
NCBI-ProteinID:
BBI31878
UniProt:
A0A3T1D1E7
LinkDB
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Position
complement(1561064..1561852)
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AA seq
262 aa
AA seq
DB search
MSGMDTDQLQTLDRGLEVMMRLVERDGAWGVAELSLASGFNKSTTFRILRTLQRRGFVSQ
LPDGKYEARVEIFQFIMDRLSDRLNVQRVARSELERLASEVKETVTLSIISNRQVKCLDK
VDSTAAVHVTHLLGRLSPIHLGSSGKAILAFLEQQEQDSYMDPLSLKSSSENAIIDVHKL
TNDLEITRRVGYSESHQELDQGVSAVAAPIFDRFGRINGSLTILGFTQDFTSDITKQYGE
AVKKAAATISVALGYSLVPRTS
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaatggatacagaccaactgcaaacactggatcgaggattggaagttatgatg
cgactggttgaaagagatggagcatggggtgtggctgaactctcgcttgcttccggcttc
aataaatcaaccaccttccgtattcttcgtacgcttcagcggcggggattcgtatcccag
ctacctgacggaaagtatgaggcacgtgtggaaatatttcaatttattatggaccgcctg
tccgatagattgaatgttcagcgagttgcacgcagcgaattagaacgtctggcctctgaa
gtgaaggagacggttactttatctatcatttctaatcgccaggtgaagtgtctcgataaa
gtggacagtacggcagctgttcatgtaacgcatctactcggtcgtttgagcccaattcat
ttgggatcttccggtaaggcgattcttgcatttcttgaacaacaggaacaagatagttat
atggatcccctatcattgaagtcatcttccgaaaatgcaattattgatgtccataaatta
acaaatgaccttgagataacccgtcgagtgggatattccgaatcacaccaggaattggat
caaggcgtcagtgcagtagccgcccccatatttgaccgctttggccggattaatgggagc
cttacgattctaggttttactcaggatttcacatctgatataaccaaacaatatggagaa
gccgttaaaaaagccgccgctacaatttcagtagctcttggttattctttggtaccaagg
acaagttaa
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