Cohnella abietis: KCTCHS21_16390
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Entry
KCTCHS21_16390 CDS
T05979
Name
(GenBank) hypothetical protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
cohn
Cohnella abietis
Brite
KEGG Orthology (KO) [BR:
cohn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cohn03016
]
KCTCHS21_16390
Enzymes [BR:
cohn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
KCTCHS21_16390
Transfer RNA biogenesis [BR:
cohn03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
KCTCHS21_16390
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
FTCD_C
Motif
Other DBs
NCBI-ProteinID:
BBI32240
UniProt:
A0A3T1D298
LinkDB
All DBs
Position
complement(1969501..1969956)
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AA seq
151 aa
AA seq
DB search
MHALGALAAEVAADTAPFALALTEAGTFGPPSTPRVLWCGLAEPAAPSGGALAALHAALG
ARLSASGFATEARPFRAHVTLARGGAAGFNPAAMATAWHKVCAMPPSSASQPEAPPLAHP
SWIVDSCTLFLTHLGQRPSYEPISNYPLGLK
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcccttggcgccttagcggctgaagtcgcagccgatacggcgccattcgcgctt
gcgctgacggaggcgggcaccttcggcccgccgtcaacgccgcgcgtgctttggtgcggc
ctggccgagccggccgcaccaagcgggggcgcgctagccgcgctgcacgcggcgcttggc
gcgcgcctttccgcctccggcttcgccacggaggcgaggccctttcgcgcgcacgtgacg
ctcgcgcgaggaggcgccgccgggttcaatccggcggcaatggcaacggcatggcacaaa
gtgtgcgccatgccgccttccagcgcttcgcagccagaagcgcctcccttagcccaccca
tcatggattgtcgacagctgcacactgttcctcacccatctcggccaacgccccagctac
gagccaataagcaactaccccttaggcctaaagtag
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