Cohnella abietis: KCTCHS21_20200
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Entry
KCTCHS21_20200 CDS
T05979
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
cohn
Cohnella abietis
Brite
KEGG Orthology (KO) [BR:
cohn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cohn03009
]
KCTCHS21_20200
Enzymes [BR:
cohn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
KCTCHS21_20200
Ribosome biogenesis [BR:
cohn03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
KCTCHS21_20200
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
BBI32621
UniProt:
A0A3T1D3K1
LinkDB
All DBs
Position
2335352..2336194
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AA seq
280 aa
AA seq
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MKVTIRLDKMLGNLGYGTRSQIKILIKQGAVAVNGKLAKDHGMQINPKEDEVVLDGETIK
YRDTVYVLLHKPAGVISATEDSRDQTVIDLLDEDLAVLSPFPVGRLDKDTEGLLIITNDG
KLSHELLSPRKHVPKTYRALVAGDVGTDDAEAFLKGVALDDGYETMPAQLLVRAKTRNDG
APEVEDELYATEMIDAIKLAPKQEEEISMDVLSWIELTIHEGKFHQVKRMFEAVGKKVLY
LRRISMGPLQLDASLAPGEWRELTEEEVESLRNYRKEGKV
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtaacaatacgattggacaagatgctcggaaatctaggatatggcacacgtagc
caaattaaaattcttattaaacaaggtgcagtcgctgtaaacggaaagctagctaaagat
cacggaatgcaaattaatcccaaagaagatgaagtggtgcttgatggggaaacgataaaa
tatcgagacactgtatatgtcctgcttcataagcctgcaggagtcatttctgcgactgag
gatagccgggaccaaacggtcatcgacttgctggatgaagatttggctgtgctgtcaccc
tttcctgttgggcggctggataaagacaccgaaggcttgctaattattacgaatgacggg
aagctatctcatgaattattgtcaccacgtaagcatgtccccaagacataccgggctcta
gtagcaggtgatgttggaacggacgatgctgaggccttcttaaagggtgtagctttagat
gacggctacgagactatgccagcgcaattgctggtgagggcaaaaacaagaaatgatggg
gcccctgaagttgaagatgagctttatgctactgagatgatagacgccattaagcttgca
cctaagcaagaggaagagatttcgatggatgttcttagctggattgagcttacgattcac
gaaggtaaattccatcaggttaaaaggatgttcgaagcagttggtaaaaaggtgctgtac
ctgaggcgtatttcgatggggccgctacagctggatgcgtctctcgctcctggagagtgg
agagagctgactgaagaagaagtggagagtttgcgtaattatcggaaggaaggcaaggta
tga
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