Cohnella abietis: KCTCHS21_21580
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Entry
KCTCHS21_21580 CDS
T05979
Symbol
ypdB
Name
(GenBank) alpha-mannosidase
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
cohn
Cohnella abietis
Pathway
cohn00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
cohn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
KCTCHS21_21580 (ypdB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cohn04131
]
KCTCHS21_21580 (ypdB)
Enzymes [BR:
cohn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
KCTCHS21_21580 (ypdB)
Membrane trafficking [BR:
cohn04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
KCTCHS21_21580 (ypdB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Glyco_hydro_38
Alpha-mann_mid
Glyco_hydro38C2
Motif
Other DBs
NCBI-ProteinID:
BBI32759
UniProt:
A0A3T1D409
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All DBs
Position
2523003..2525666
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AA seq
887 aa
AA seq
DB search
MSKKTVHIISHSHWDREWYMPFENFRMRLVDLMDTTLELLESLDNGFCYFHLDGHVLLVD
DYLEIRPEQEDRIRSLVASGKLFIGPWYVLQDAFLTSGEAQVRNLQIGIERAEQLGGVTK
VGYFPDTFGNISQSAQLLRGFEIDTAVFGRGINSIAENNTVLNDRESGYHTELWWESPDG
SKVLSVFLANWYHNGMELPTDADRALQRSQFMLKNVERYASTDHLLLMNGCDHQPVQRDV
GKAILTFNEVLPDYDFVHSNFPEYLSKLQTNIESYQTVAGELIGEFTDGMNTLVNTASSR
MYLKQWNARVQQELERWVEPFTALAHLMGEPYPAAFVKHAWKLLLQNHPHDSICGCSLDE
VHDEMVTRFQKAYQIALGLSSKALKSIASKVNTASLISQADESVEGQEVFPVVVFNPLGW
DREDWVEAIIDTENELLHLQYKLFDSDGCEIYCEVEDAEWVHGFTLPDDQFRIPWRKRRY
KLRFQAKQVPAVGYTTFLWKSSNGHDSEPELKGAENTFCDIDGAGGRMENEFFNIEVKQD
GRLNVTDKQSGNIYYDLFVLEDSGDIGNEYNYKAAENASPYLSQGRKVKMEILSSGPLAK
LKVIYQLELPAERDGNMRSSKLISQEIEVILTLGTGMKRIDVEVHLDNQLKDHRLRVLFP
TDLITDSVHADAPFDVVKRSISRWSGWDNPSSCERMQSFFSLSDGEQGLTIVSSGLPEYE
VLRDSRNTMALTLLRCVGELGDWNYFPTPGAQCQGDFTARFAIIPHSGNYLEATREVYAY
NAPLLAAATGIHAGVNGTSYSAVKISSTAVLMTSLSKATTYEGMQLRVVNLSEREEIVQV
SGELIRNAKIINETQLNEKVVGGIVKEGEVTTLVIPPKKMVTLGVYV
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaaaaaaacggttcacatcatttctcactctcattgggatcgggaatggtatatg
ccattcgaaaattttcgaatgcggttggttgatttgatggatacaacactcgaattactg
gaatcattggacaacggtttttgttatttccatttagatggccatgtattattagtggat
gattatttagaaattcgtcctgagcaagaggatcgaattcgatcgttggttgcgtctgga
aagctattcattggaccatggtatgtcctgcaagatgcatttttaacaagtggtgaagcg
caagtgcgaaatttgcaaattggaattgaacgtgctgagcaattaggaggagtaactaag
gttggttattttccggacacgtttgggaatatttcgcaatcagcacagctacttcgcggt
tttgaaatcgataccgctgtatttgggaggggtatcaattcaattgctgaaaataacact
gtactcaatgaccgagaatcgggttatcatacggaattatggtgggaatccccggatggt
tcgaaagtattgtcagtgtttctggcaaactggtatcataacgggatggaactgccgaca
gatgctgatcgtgctttgcagcgcagtcaattcatgctcaaaaatgttgaacggtacgcg
tcgacagatcatttgctgttaatgaacgggtgcgatcatcagcctgttcaaagggatgtt
ggcaaggctatactaaccttcaatgaggtgcttccggattatgattttgtccatagcaac
tttccagagtatttatctaagctgcaaacaaatatagaatcgtatcaaacggtagcagga
gaattaataggtgaatttactgatggaatgaatacgctggttaataccgcttcctccaga
atgtatctcaagcaatggaatgctcgtgtccaacaggagctggaacgttgggtggagccg
tttacggcacttgcacatttgatgggcgaaccatatccggcagcctttgttaagcatgcc
tggaaacttcttctgcagaatcatccacacgatagcatttgcggatgtagcttggatgag
gtgcacgatgaaatggtaacgcgcttccagaaggcctatcagatcgcattgggacttagc
tctaaggctctaaaatctattgcttccaaagtgaatacagcttccttgatctctcaagcg
gatgaaagcgtcgaaggccaagaggtttttccagtggtggtatttaatccgctcggatgg
gatcgagaggattgggtcgaagcaattatcgatacggaaaatgagttattacacctgcag
tacaaactatttgattcggacggatgcgagatttactgcgaggtagaagatgcggaatgg
gtgcatggctttacgcttccggatgaccaattccgtattccttggcggaagcgtcgatat
aagctgcgttttcaagcaaagcaagtaccggcagtcggctacaccacctttctttggaaa
tcaagtaatggacatgactcggaaccagaattaaaaggggcggagaatactttttgcgat
atagatggtgcaggcggacgaatggaaaacgaattttttaatattgaagtcaagcaagac
ggcaggttgaatgttaccgataagcaatctggtaacatttattacgaccttttcgtgctt
gaagacagtggtgatattggcaatgagtacaattataaggctgctgagaatgcttcaccg
tacctttcgcagggtagaaaggtaaagatggaaattctatcctccggacctttagccaaa
ttaaaagtaatttatcagcttgaattgcccgcggaacgtgatggaaatatgcgctcctct
aaattaataagccaggaaattgaagtcattctcacattggggacgggaatgaagagaatt
gacgtggaagttcacctcgataatcaactcaaggatcacagactgagggttctatttcca
acggatctaattacggatagtgttcatgcggatgctccgtttgatgtcgtgaaacgatca
atttctcgctggagtggatgggataacccttccagctgtgagcgtatgcaatccttcttc
agtctttcggacggcgaacagggactgactattgtatcaagtggattgccggaatacgag
gtgctgcgcgatagtcgaaatacgatggcactcaccttgcttcggtgtgtcggtgagctt
ggcgattggaactatttccctacccctggcgcccaatgtcaaggtgatttcacagctcga
tttgcgatcattccccatagtggtaattatctagaggctactagagaggtgtatgcgtat
aatgcacctttgttagcagctgcaactggcattcatgcaggagtgaacggcacaagctat
tctgcagttaaaatatcatcaactgctgtactaatgacttcactgagtaaggcgacgacc
tatgaggggatgcaattacgtgttgtaaacctaagtgagcgggaggaaatcgttcaggta
tctggggagctaatccgaaacgccaaaataataaatgaaacgcaattaaatgagaaggtg
gttggtgggattgtaaaggagggtgaagtgactacgttggtgattcctcctaaaaaaatg
gttacgttgggtgtatatgtgtga
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